CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1607851_at

Gene name hypothetical protein LOC100266538

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1607851_at CF415102 hypothetical protein LOC100266538 - 9e-2 At1g04660 glycine-rich protein S.X. H.G.
0.91 98.8 1611748_s_at CB969590 similar to PDF - 1e-1 At2g42840 PDF1 (PROTODERMAL FACTOR 1) S.X. H.G.
0.80 93.6 1613074_at CB969590 similar to PDF - 1e-1 At2g42840 PDF1 (PROTODERMAL FACTOR 1) S.X. H.G.
0.80 93.6 1617280_s_at CF373668 hypothetical protein LOC100258720 - 5e-3 At2g27385 unknown protein S.X. H.G.
0.80 93.6 1609418_s_at CF568955 hypothetical protein LOC100246054 /// hypothetical protein LOC100255543 /// hypothetical protein LOC100258516 /// hypothetical protein LOC100261331 /// hypothetical protein LOC100266538 - 4e+0 At5g35375 unknown protein S.X. H.G.
0.61 83.2 1615124_at CF514122 hypothetical protein LOC100258563 - 8e-5 At1g71691 GDSL-motif lipase/hydrolase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.9 96.6 GSM436397 V. riparia (VR, PI588259) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.8 96.4 GSM436362 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.6 96.0 GSM436359 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.5 95.7 GSM436376 Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.5 95.7 GSM436383 Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.5 95.7 GSM436374 Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.5 95.7 GSM436369 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436412 V. riparia (VR, PI588259) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436377 Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436400 V. riparia (VR, PI588259) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.48 3e-113 406 1609418_s_at CF568955 hypothetical protein LOC100246054 /// hypothetical protein LOC100255543 /// hypothetical protein LOC100258516 /// hypothetical protein LOC100261331 /// hypothetical protein LOC100266538 - 4e+0 At5g35375 unknown protein C.G. S.X.
0.04 4e-1 34 1620986_at CF372684 - - 2e-2 At2g31957 LCR75 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 75) C.G. S.X.
0.01 4e-1 34 1617060_s_at CB977776 glutathione reductase (NADPH) - 3e-84 At3g54660 GR (GLUTATHIONE REDUCTASE) C.G. S.X.
0.02 2e+0 32 1617279_at BQ796438 hypothetical protein LOC100251912 - 3e-2 At2g25700 ASK3 (ARABIDOPSIS SKP1-LIKE 3) C.G. S.X.
0.02 2e+0 32 1614808_at BQ792403 hypothetical protein LOC100253735 - 2e-15 At1g53280 DJ-1 family protein C.G. S.X.
0.02 2e+0 32 1612930_at CB975986 hypothetical protein LOC100255839 - 6e-7 At4g25570 ACYB-2 C.G. S.X.
0.02 2e+0 32 1606705_at CD721559 hypothetical protein LOC100265189 - 2e-5 At3g13310 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.02 7e+0 30 1622064_at CF606041 R2R3 Myb14 transcription factor - 6e-1 At1g50220 unknown protein C.G. S.X.
0.02 7e+0 30 1619587_at CF200656.1 - - 1e-9 At4g33865 40S ribosomal protein S29 (RPS29C) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 9e-2 38 Arabidopsis thaliana At1g04660 839454 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA - - - C.G. S.X.
0.03 5e-1 36 Glycine max GmaAffx.39719.1.S1_at BG509204 - - 9e-2 At5g61660 glycine-rich protein C.G. S.X.
0.03 3e+0 32 Hordeum vulgare HW01N13u_at HW01N13u - - 4e+0 At3g03840 auxin-responsive protein, putative C.G. S.X.
0.03 3e+0 34 Oryza sativa Os05g0477900 BI802162 - Nonspecific lipid-transfer protein 1 (LTP 1)(Major allergen Pru d 3) 5e+0 At4g22890 PGR5-LIKE A C.G. S.X.
0.04 5e-1 36 Populus trichocarpa PtpAffx.215823.1.S1_at pmrna30236 hypothetical protein - 4e-1 At3g61890 ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12) C.G. S.X.
0.03 2e+0 34 Triticum aestivum TaAffx.57986.1.S1_at CA623338 - - 5e-1 At4g19270 unknown protein C.G. S.X.
0.03 3e+0 32 Zea mays Zm.18100.3.A1_at BI097725 ultraviolet-B-repressible protein - 9e-2 At4g27810 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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