CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1607845_at

Gene name hypothetical protein LOC100265783

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.95 99.6 1607845_at CF415092 hypothetical protein LOC100265783 - 3e-3 At3g25400 - S.X. H.G.
0.50 72.7 1618920_at CD013695 hypothetical protein LOC100260726 - 4e-7 At4g25980 cationic peroxidase, putative S.X. H.G.
0.44 64.1 1617748_a_at CD801712 hypothetical protein LOC100262607 - 6e-3 At4g37980 ELI3-1 (ELICITOR-ACTIVATED GENE 3-1) S.X. H.G.
0.33 45.7 1609568_at CD801712 hypothetical protein LOC100262607 - 6e-3 At4g37980 ELI3-1 (ELICITOR-ACTIVATED GENE 3-1) S.X. H.G.
0.33 45.7 1618061_a_at CF514699 hypothetical protein LOC100262607 - 1e-64 At3g60750 transketolase, putative S.X. H.G.
0.29 37.7 1620983_at CF207286 hypothetical protein LOC100267272 - 3e-10 At5g01320 pyruvate decarboxylase, putative S.X. H.G.
0.24 28.7 1616685_at CF211776 hypothetical protein LOC100244128 - 2e+0 At4g24990 ATGP4 S.X. H.G.
0.14 14.4 1619235_at CB969704 hypothetical protein LOC100266132 - 3e-5 At1g15380 lactoylglutathione lyase family protein / glyoxalase I family protein S.X. H.G.
0.11 11.3 1613062_at CF372388 - - 2e+0 At1g29610 - S.X. H.G.
0.05 6.0 1616456_at CF207729 hypothetical protein LOC100245069 - 4e+0 At5g52650 40S ribosomal protein S10 (RPS10C) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.9 99.9 GSM147699 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation 28
12.0 99.8 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
9.9 99.6 GSM147681 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 10
8.6 99.5 GSM147693 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation 22
7.0 99.1 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
5.4 98.3 GSM147715 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 44
5.2 98.2 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
5.0 98.0 GSM147675 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 4
4.8 97.8 GSM147687 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 16
4.7 97.7 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.27 5e-33 139 1620898_at CB976503 hypothetical protein LOC100266931 - 2e-2 At3g25400 - C.G. S.X.
0.06 1e-3 42 1622603_at CB344263 hypothetical protein LOC100247693 - 3e-19 At3g25400 - C.G. S.X.
0.04 4e-3 40 1620663_at CF607591 hypothetical protein LOC100248542 - 1e+0 At5g47200 ATRAB1A C.G. S.X.
0.02 9e-1 32 1618999_at CF403613 hypothetical protein LOC100262446 - 1e-21 At4g02030 - C.G. S.X.
0.04 9e-1 32 1613977_at CF208330 - - 4e+0 At4g01310 ribosomal protein L5 family protein C.G. S.X.
0.04 9e-1 32 1608753_at CF568946 - - 1e+0 At1g50020 unknown protein C.G. S.X.
0.04 9e-1 32 1607981_at CF515284 - - 4e+0 At5g41910 RNA polymerase II mediator complex protein-related C.G. S.X.
0.03 4e+0 30 1622453_at CB002354 - - 1e-3 At2g13690 PRLI-interacting factor, putative C.G. S.X.
0.03 4e+0 30 1621820_at CF516134 - - 2e-1 At1g65030 transducin family protein / WD-40 repeat family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 3e-3 42 Arabidopsis thaliana At3g25400 822124 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMPAF - - - C.G. S.X.
0.34 3e-19 95 Glycine max GmaAffx.82550.1.S1_at BM091647 - - 3e-19 At3g25400 - C.G. S.X.
0.09 7e-12 69 Hordeum vulgare Contig3603_at Contig3603 - - 2e-15 At3g25400 - C.G. S.X.
0.16 3e-8 59 Oryza sativa Os02g0479300 AB110198.1 - Pyrophosphohydrolase MazG RS21-C6 family protein 2e-2 At3g25400 - C.G. S.X.
0.41 1e-9 63 Populus trichocarpa PtpAffx.202621.1.S1_at pmrna5240 hypothetical protein - 1e-12 At3g25400 - C.G. S.X.
0.13 3e-6 52 Triticum aestivum TaAffx.24464.1.S1_at CA719119 - - 4e-9 At3g25400 - C.G. S.X.
0.09 4e-10 63 Zea mays Zm.6194.1.A1_at AW519914 RS21-C6 protein - 3e-5 At3g25400 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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