Gene omics information

Query gene ID	1607831_at
Gene name	hypothetical protein LOC100249242
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1607831_at	BQ799075	hypothetical protein LOC100249242	-	8e-7	At3g03950	protein binding	S.X.	H.G.	Please select
0.73	90.8	1616515_at	CF211788	hypothetical protein LOC100259212	-	5e+0	At5g44900	transmembrane receptor	S.X.	H.G.	Please select
0.53	75.2	1606978_s_at	CF207835	hypothetical protein LOC100242245	-	5e-1	At1g16680	DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putative	S.X.	H.G.	Please select
0.50	72.7	1613050_at	CB971087	hypothetical protein LOC100248215	-	5e-4	At1g20470	auxin-responsive family protein	S.X.	H.G.	Please select
0.50	72.7	1612058_at	CF513284	hypothetical protein LOC100259015	-	3e-15	At2g33845	DNA-binding protein-related	S.X.	H.G.	Please select
0.29	37.7	1607257_at	CB342664	hypothetical protein LOC100265075	-	1e-22	At1g76510	ARID/BRIGHT DNA-binding domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.4	95.5	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436360	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436380	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436376	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM436383	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436382	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436352	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436377	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436362	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	9e-10	63	1621659_at	BQ798789	hypothetical protein LOC100253534	-	5e-52	At1g55500	ECT4	C.G.	S.X.	Please select
0.01	8e-1	34	1622029_at	CB979296	-	-	4e-1	At4g01250	WRKY22	C.G.	S.X.	Please select
0.01	8e-1	34	1621110_at	CF212872	hypothetical protein LOC100268077	-	1e-10	At3g24506	unknown protein	C.G.	S.X.	Please select
0.01	8e-1	34	1618432_at	CB345244	hypothetical protein LOC100267315	-	6e+0	At5g13825	unknown protein	C.G.	S.X.	Please select
0.02	8e-1	34	1616395_at	CF517518	-	-	2e-2	At3g15820	phosphatidic acid phosphatase-related / PAP2-related	C.G.	S.X.	Please select
0.02	8e-1	34	1613829_at	CF213502	hypothetical protein LOC100256716	-	6e-18	At1g57620	emp24/gp25L/p24 family protein	C.G.	S.X.	Please select
0.01	8e-1	34	1612994_at	CF415215	hypothetical protein LOC100255224	-	4e-17	At1g74520	ATHVA22A	C.G.	S.X.	Please select
0.02	8e-1	34	1611069_at	CF512263	hypothetical protein LOC100243497	-	1e+0	At3g56710	SIB1 (SIGMA FACTOR BINDING PROTEIN 1)	C.G.	S.X.	Please select
0.02	3e+0	32	1621813_at	CA817946	-	-	3e-1	At1g06620	2-oxoglutarate-dependent dioxygenase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	8e-7	56	Arabidopsis thaliana	At3g03950	819550	protein binding	Physically interacts with CIPK1. Located in the nucleus.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	6e-2	40	Glycine max	Gma.1752.2.S1_at	BI785614	-	-	2e-16	At5g61020	ECT3	C.G.	S.X.	Please select
0.03	1e-6	54	Hordeum vulgare	Contig3786_at	Contig3786	-	-	2e-18	At3g13460	ECT2	C.G.	S.X.	Please select
0.09	4e-10	67	Oryza sativa	Os05g0105600	AK069692.1	-	YT521-B-like protein family protein	4e-13	At3g03950	protein binding	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.26	5e-27	123	Populus trichocarpa	PtpAffx.8676.1.A1_at	CV269893	hypothetical protein	-	2e-13	At1g55500	ECT4	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	3e-6	54	Triticum aestivum	Ta.6121.3.S1_a_at	CA603081	-	-	3e-16	At5g61020	ECT3	C.G.	S.X.	Please select
0.04	5e-3	42	Zea mays	Zm.5103.1.A1_at	AI600852	-	-	3e-15	At3g13460	ECT2	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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