CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1607756_s_at

Gene name hypothetical protein LOC100241574

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 94.6 1607756_s_at CF519234 hypothetical protein LOC100241574 - 3e-40 At3g08510 ATPLC2 (PHOSPHOLIPASE C 2) S.X. H.G.
0.47 67.7 1615788_at CF511058 hypothetical protein LOC100250348 - 2e+0 At5g47170 unknown protein S.X. H.G.
0.33 45.7 1612757_at CD801743 hypothetical protein LOC100241266 - 1e+0 At2g32560 F-box family protein S.X. H.G.
0.29 37.7 1614120_at CB349861 - - 4e-3 At5g40550 unknown protein S.X. H.G.
0.24 28.7 1615991_s_at CF404409 hypothetical protein LOC100241833 - 1e-22 At4g38130 HD1 (HISTONE DEACETYLASE 1) S.X. H.G.
0.21 24.0 1621252_at CB978314 hypothetical protein LOC100263936 - 2e-8 At3g08620 KH domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.7 96.2 GSM436411 V. riparia (VR, PI588259) SD, 13h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436392 V. riparia (VR, PI588259) LD, 15h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436391 V. riparia (VR, PI588259) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436397 V. riparia (VR, PI588259) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436413 V. riparia (VR, PI588259) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.8 93.4 GSM436410 V. riparia (VR, PI588259) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.4 91.3 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM436399 V. riparia (VR, PI588259) LD, 15h 14 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM436359 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM436390 V. riparia (VR, PI588259) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.55 0 1013 1610447_at CF205721.1 hypothetical protein LOC100241574 - 2e-24 At3g08510 ATPLC2 (PHOSPHOLIPASE C 2) C.G. S.X.
0.04 2e-1 36 1617369_at CB916656 - - 1e-3 At5g58700 phosphoinositide-specific phospholipase C family protein C.G. S.X.
0.04 2e-1 36 1613552_at CB916656 hypothetical LOC100243703 - 1e-3 At5g58700 phosphoinositide-specific phospholipase C family protein C.G. S.X.
0.02 8e-1 34 1622034_at CD715701 - - 1e+0 At5g60670 60S ribosomal protein L12 (RPL12C) C.G. S.X.
0.02 8e-1 34 1617604_at CF609932 hypothetical protein LOC100258898 - 1e+0 At4g21745 - C.G. S.X.
0.01 8e-1 34 1612461_at CB969270 hypothetical protein LOC100257379 - 1e-1 At3g10220 tubulin folding cofactor B C.G. S.X.
0.02 8e-1 34 1610276_s_at CB346407 hypothetical protein LOC100244121 - 7e-6 At5g40370 glutaredoxin, putative C.G. S.X.
0.02 8e-1 34 1609408_at CD715701 - - 1e+0 At5g60670 60S ribosomal protein L12 (RPL12C) C.G. S.X.
0.02 8e-1 34 1608295_at CA817667 hypothetical protein LOC100258713 - 3e-7 At5g59610 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 3e-40 167 Arabidopsis thaliana At3g08510 819999 ATPLC2 (PHOSPHOLIPASE C 2) Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol. - - - C.G. S.X.
0.41 7e-82 305 Glycine max GmaAffx.91549.1.S1_at CF807274 phosphatidylinositol-specific phospholipase C /// phosphoinositide-specific phospholipase C P13 - 5e-15 At3g08510 ATPLC2 (PHOSPHOLIPASE C 2) C.G. S.X.
0.06 1e-3 44 Hordeum vulgare Contig22073_at Contig22073 - - 1e+0 At3g05937 unknown protein C.G. S.X.
0.09 3e-17 91 Oryza sativa Os07g0694000 AF332874.1 - Phosphoinositide-specific phospholipase C 8e-8 At2g40116 phosphoinositide-specific phospholipase C family protein C.G. S.X.
0.39 3e-105 383 Populus trichocarpa PtpAffx.918.1.S1_at CV262846 hypothetical protein - 9e-28 At3g08510 ATPLC2 (PHOSPHOLIPASE C 2) C.G. S.X.
0.03 4e-2 40 Triticum aestivum TaAffx.117121.1.S1_at CA692520 - - 6e-2 At4g38530 ATPLC1 (ARABIDOPSIS THALIANA PHOSPHOLIPASE C 1) C.G. S.X.
0.04 2e-2 40 Zea mays Zm.4416.1.S1_at AY536525.1 phospholipase C - 5e-3 At5g58700 phosphoinositide-specific phospholipase C family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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