Gene omics information

Query gene ID	1607726_at
Gene name	hypothetical protein LOC100262331
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	83.2	1607726_at	CB349094	hypothetical protein LOC100262331	-	8e-25	At4g34100	protein binding / zinc ion binding	S.X.	H.G.	Please select
0.71	89.5	1615901_at	CF405787	hypothetical protein LOC100248277	-	5e+0	At4g13075	RALFL30 (RALF-LIKE 30)	S.X.	H.G.	Please select
0.67	87.9	1614710_at	CF404864	-	-	1e-1	At1g53625	unknown protein	S.X.	H.G.	Please select
0.67	87.9	1613129_at	CB970410	hypothetical protein LOC100266068	-	2e-13	At4g17330	ATG2484-1	S.X.	H.G.	Please select
0.59	80.6	1617845_at	CD800649	hypothetical protein LOC100263968	-	4e-35	At2g38630	-	S.X.	H.G.	Please select
0.57	79.8	1611483_at	CF207449	hypothetical protein LOC100253154	-	7e+0	Atmg00320	-	S.X.	H.G.	Please select
0.53	75.2	1609777_at	CF519086	hypothetical protein LOC100257098	-	5e+0	At5g44973	-	S.X.	H.G.	Please select
0.36	50.7	1616867_at	CF405655	hypothetical protein LOC100254223	-	2e-17	At3g01090	AKIN10 (Arabidopsis SNF1 kinase homolog 10)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.0	94.2	GSM436397	V. riparia (VR, PI588259) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436398	V. riparia (VR, PI588259) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436399	V. riparia (VR, PI588259) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436402	V. riparia (VR, PI588259) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436410	V. riparia (VR, PI588259) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436412	V. riparia (VR, PI588259) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436404	V. riparia (VR, PI588259) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436400	V. riparia (VR, PI588259) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.97	0	2038	1611794_s_at	CB349094	hypothetical protein LOC100262331	-	8e-25	At4g34100	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.76	0	1340	1607689_at	CF203350.1	-	-	3e-8	At4g34100	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.01	3e+0	32	1620348_at	CB347135	hypothetical protein LOC100243757	-	5e-13	At4g25200	ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)	C.G.	S.X.	Please select
0.01	3e+0	32	1620033_at	CB003265	-	-	2e-87	At5g03730	CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1)	C.G.	S.X.	Please select
0.02	3e+0	32	1619194_at	CB981838	-	-	4e+0	At4g07820	pathogenesis-related protein, putative	C.G.	S.X.	Please select
0.02	3e+0	32	1616820_at	CF210812	-	-	2e-1	At3g27835	-	C.G.	S.X.	Please select
0.01	3e+0	32	1616234_at	CB003265	-	-	2e-87	At5g03730	CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1)	C.G.	S.X.	Please select
0.02	3e+0	32	1614076_at	CB346355	hypothetical protein LOC100254333	-	2e-1	At2g30560	glycine-rich protein	C.G.	S.X.	Please select
0.02	3e+0	32	1610948_at	CB344798	-	-	5e-1	At1g78450	SOUL heme-binding family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	8e-25	115	Arabidopsis thaliana	At4g34100	829556	protein binding / zinc ion binding	F:protein binding, zinc ion binding;P:unknown;C:chloroplast;MPOFV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.39	7e-63	242	Glycine max	Gma.3249.1.S1_at	BQ298433	-	-	9e-21	At4g34100	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.08	8e-14	77	Hordeum vulgare	Contig6884_at	Contig6884	-	-	9e-5	At4g34100	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.05	2e-8	61	Oryza sativa	Os06g0639000	AK059723.1	-	Conserved hypothetical protein	5e-9	At4g34100	protein binding / zinc ion binding	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.30	1e-76	287	Populus trichocarpa	Ptp.3492.1.S1_s_at	CV239474	hypothetical protein	-	2e-6	At4g34100	protein binding / zinc ion binding	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.08	4e-8	59	Triticum aestivum	Ta.23286.1.S1_at	CA656009	-	-	3e-8	At4g34100	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.05	3e-13	75	Zea mays	Zm.2007.1.A1_at	AY105117.1	-	-	2e-11	At4g34100	protein binding / zinc ion binding	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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