Gene omics information

Query gene ID	1607695_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1607695_at	CF208550	-	-	2e-9	At1g15880	GOS11 (golgi snare 11)	S.X.	H.G.	Please select
0.67	87.9	1617825_s_at	CF205420.1	-	-	3e-23	At1g15880	GOS11 (golgi snare 11)	S.X.	H.G.	Please select
0.61	83.2	1621710_at	CF201680.1	-	-	3e-1	At1g59690	-	S.X.	H.G.	Please select
0.38	53.6	1613156_at	CF209286	hypothetical protein LOC100247989	-	6e-5	At1g53400	unknown protein	S.X.	H.G.	Please select
0.33	45.7	1607563_at	CF203757.1	-	-	7e-49	At5g61510	NADP-dependent oxidoreductase, putative	S.X.	H.G.	Please select
0.22	25.6	1617872_s_at	CF404326	hypothetical protein LOC100257528	-	1e-66	At3g04600	tRNA synthetase class I (W and Y) family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.6	98.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
6.4	98.9	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
5.2	98.2	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
4.6	97.6	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
3.9	96.6	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
3.7	96.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.6	96.0	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.6	96.0	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
3.6	96.0	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
3.5	95.7	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.17	4e-76	284	1617825_s_at	CF205420.1	-	-	3e-23	At1g15880	GOS11 (golgi snare 11)	C.G.	S.X.	Please select
0.07	8e-25	113	1609811_at	CF208639	-	-	4e+0	At5g37850	SOS4 (SALT OVERLY SENSITIVE 4)	C.G.	S.X.	Please select
0.01	6e-1	34	1614206_at	CA816816	hypothetical protein LOC100246568	-	7e-82	At1g10760	SEX1 (STARCH EXCESS 1)	C.G.	S.X.	Please select
0.02	6e-1	34	1613994_at	BQ794302	hypothetical protein LOC100260766	-	6e-21	At2g31090	unknown protein	C.G.	S.X.	Please select
0.02	6e-1	34	1613935_at	BQ795856	hypothetical protein LOC100263768	-	4e-5	At5g59080	unknown protein	C.G.	S.X.	Please select
0.02	6e-1	34	1608722_at	BQ792556	hypothetical protein LOC100252840	-	1e-1	At5g40630	ubiquitin family protein	C.G.	S.X.	Please select
0.01	3e+0	32	1621982_s_at	BQ794582	hypothetical protein LOC100265955	-	1e-14	At1g51410	cinnamyl-alcohol dehydrogenase, putative (CAD)	C.G.	S.X.	Please select
0.02	3e+0	32	1617788_at	CF207517	hypothetical protein LOC100243898	-	2e-2	At4g18000	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	1616868_at	CB977238	hypothetical protein LOC100256467	-	3e-1	At3g52910	AtGRF4 (GROWTH-REGULATING FACTOR 4)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.15	2e-9	63	Arabidopsis thaliana	At1g15880	838158	GOS11 (golgi snare 11)	Golgi SNARE 11 protein (GOS11)	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.14	6e-17	89	Glycine max	Gma.1413.1.S1_a_at	AW734487	-	-	8e-37	At1g15880	GOS11 (golgi snare 11)	C.G.	S.X.	Please select
0.03	3e-1	36	Hordeum vulgare	Contig7723_at	Contig7723	-	-	2e+0	At5g55280	FTSZ1-1	C.G.	S.X.	Please select
0.02	1e+0	36	Oryza sativa	Os.26778.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.09	8e-10	65	Populus trichocarpa	PtpAffx.73007.1.A1_at	CV246599	-	-	2e-16	At1g15880	GOS11 (golgi snare 11)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	6e-1	36	Triticum aestivum	TaAffx.31832.1.S1_at	CA607026	-	-	3e-1	At3g28440	unknown protein	C.G.	S.X.	Please select
0.04	2e-5	50	Zea mays	Zm.18090.1.A1_at	AY106351.1	-	-	1e-8	At1g15880	GOS11 (golgi snare 11)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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