Gene omics information

Query gene ID 1607354_at
Gene name hypothetical protein LOC100250578
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8995.51607354_atCB968898hypothetical protein LOC100250578-2e-2At1g76990ACR3S.X.H.G.
0.6988.31613394_atCB342776--0Atcg01050-S.X.H.G.
0.6283.31616688_s_atCB342776--0Atcg01050-S.X.H.G.
0.6081.91607048_atCB914076hypothetical protein LOC100249101-7e-28At1g10500ATCPISCA (chloroplast-localized IscA-like protein)S.X.H.G.
0.6081.91610039_s_atCA817529similar to NADH-plastoquinone oxidoreductase subunit K-0Atcg00480-S.X.H.G.
0.5375.21613581_atCB981734hypothetical protein LOC100262899-1e-17At3g17800-S.X.H.G.
0.5173.21617060_s_atCB977776glutathione reductase (NADPH)-3e-84At3g54660GR (GLUTATHIONE REDUCTASE)S.X.H.G.
0.4969.31622089_atBQ800092hypothetical protein LOC100245345-1e-5At1g28140unknown proteinS.X.H.G.
0.4969.31613588_atCA818655--6e-175Atcg00730-S.X.H.G.
0.4969.31618031_s_atCF404451hypothetical protein LOC100243967-2e-12At1g79040PSBR (photosystem II subunit R)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.499.4GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
8.399.4GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.898.6GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72
4.997.9GSM299451B_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.397.2GSM299458D_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.196.9GSM147681Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation10
4.196.9GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
4.096.7GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.896.4GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.595.7GSM147718Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation47
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-2381612139_atCB921671--2e+0At1g15220CCMHC.G.S.X.
0.032e-2381608356_atCF609600hypothetical protein LOC100266187-2e+0At1g15220CCMHC.G.S.X.
0.031e+0321622529_atCF404706--7e-5At5g60360AALP (Arabidopsis aleurain-like protease)C.G.S.X.
0.031e+0321620119_atCF514654--1e+0At5g27495ion channel inhibitorC.G.S.X.
0.031e+0321615748_atCD801267--9e-4At5g65610unknown proteinC.G.S.X.
0.031e+0321610002_atCB977330hypothetical protein LOC100257473-4e-23At1g19710glycosyl transferase family 1 proteinC.G.S.X.
0.031e+0321606892_atCF516630--6e+0At5g55690MADS-box protein (AGL47)C.G.S.X.
0.035e+0301619519_atCB971445hypothetical protein LOC100250171-1e+0At4g37200HCF164C.G.S.X.
0.035e+0301619192_atCF403702hypothetical protein LOC100261238-2e-1At3g57380transferase, transferring glycosyl groupsC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.142e-240Arabidopsis thalianaAt1g76990844035ACR3F:amino acid binding;P:nitrogen compound metabolic process, metabolic process;C:cytosol;BOP---C.G.S.X.
0.134e-756Glycine maxGma.7114.1.A1_atBG156723--3e-4At1g76990ACR3C.G.S.X.
0.038e+030Hordeum vulgareHV_CEa0012B15f_s_atHV_CEa0012B15f--3e+0At5g6117040S ribosomal protein S19 (RPS19C)C.G.S.X.
0.038e+032Oryza sativaOsAffx.16001.1.S1_s_at---0C.G.S.X.
0.214e-38159Populus trichocarpaPtpAffx.205574.1.S1_x_atpmrna11015hypothetical protein-8e-53At1g76990ACR3C.G.S.X.
0.044e+032Triticum aestivumTa.18287.1.S1_atCA633298--2e+0At3g24093-C.G.S.X.
0.042e+032Zea maysZmAffx.170.1.S1_atAI668224--8e-1At1g13245RTFL17 (ROTUNDIFOLIA LIKE 17)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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