Gene omics information

Query gene ID	1607291_at
Gene name	hypothetical protein LOC100265661
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1607291_at	CB007647	hypothetical protein LOC100265661	-	2e-134	At5g52640	ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)	S.X.	H.G.	Please select
0.61	83.2	1620348_at	CB347135	hypothetical protein LOC100243757	-	5e-13	At4g25200	ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)	S.X.	H.G.	Please select
0.43	61.5	1616049_at	CD005811	-	-	3e-4	At4g13615	four F5 protein-related / 4F5 protein-related	S.X.	H.G.	Please select
0.40	57.7	1610122_at	CF517531	-	-	4e-24	At2g26150	ATHSFA2	S.X.	H.G.	Please select
0.33	45.7	1621357_s_at	CF518673	similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding	-	5e-153	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	S.X.	H.G.	Please select
0.22	25.6	1622628_at	CB349013	hypothetical protein LOC100244609	-	3e-2	At1g54050	17.4 kDa class III heat shock protein (HSP17.4-CIII)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
69.0	100.0	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
27.4	100.0	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
16.3	99.9	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
8.7	99.5	GSM436357	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
7.7	99.3	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
6.2	98.8	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
5.2	98.2	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.0	98.0	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.7	93.0	GSM287894	Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.18	3e-81	301	1618066_a_at	CF515990	hypothetical protein LOC100257736	-	2e-65	At5g52640	ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)	C.G.	S.X.	Please select
0.11	2e-54	212	1621837_at	CB349507	-	-	4e+0	At4g00810	60S acidic ribosomal protein P1 (RPP1B)	C.G.	S.X.	Please select
0.30	2e-51	202	1615279_at	CF568919	-	-	5e-98	At5g56030	HSP81-2 (HEAT SHOCK PROTEIN 81-2)	C.G.	S.X.	Please select
0.47	9e-51	200	1618009_at	CD714666	similar to heat shock protein 90	-	0	At5g56000	heat shock protein 81-4 (HSP81-4)	C.G.	S.X.	Please select
0.21	3e-26	119	1617721_at	CF568847	-	-	1e-76	At5g56030	HSP81-2 (HEAT SHOCK PROTEIN 81-2)	C.G.	S.X.	Please select
0.10	2e-18	93	1618619_at	CB970249	hypothetical LOC100246843	-	5e-78	At5g56030	HSP81-2 (HEAT SHOCK PROTEIN 81-2)	C.G.	S.X.	Please select
0.10	6e-15	81	1619931_s_at	CB349799	hypothetical LOC100246843	-	7e-130	At5g56000	heat shock protein 81-4 (HSP81-4)	C.G.	S.X.	Please select
0.06	9e-11	67	1608052_s_at	CB981502	similar to heat shock protein 90	-	5e-93	At5g56000	heat shock protein 81-4 (HSP81-4)	C.G.	S.X.	Please select
0.02	3e-4	46	1608448_at	BQ792197	hypothetical protein LOC100267648	-	1e-45	At4g24190	SHD (SHEPHERD)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.60	2e-134	480	Arabidopsis thaliana	At5g52640	835341	ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)	Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.56	1e-93	345	Glycine max	Gma.17525.1.S1_at	BG839191	-	-	0	At5g56000	heat shock protein 81-4 (HSP81-4)	C.G.	S.X.	Please select
0.44	4e-100	365	Hordeum vulgare	Contig1204_s_at	Contig1204	cytosolic heat shock protein 90	-	0	At5g56010	HSP81-3	C.G.	S.X.	Please select
0.44	2e-96	355	Oryza sativa	Os09g0482100	AB111810.1	-	Heat shock protein 82	0	At5g56030	HSP81-2 (HEAT SHOCK PROTEIN 81-2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.63	0	654	Populus trichocarpa	PtpAffx.5671.4.A1_a_at	DN484056	hypothetical protein	-	0	At5g52640	ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.36	2e-36	155	Triticum aestivum	Ta.217.1.S1_x_at	U55859.1	heat shock protein 80	-	0	At5g56030	HSP81-2 (HEAT SHOCK PROTEIN 81-2)	C.G.	S.X.	Please select
0.50	4e-103	375	Zea mays	Zm.16505.3.A1_at	CF019822	-	-	0	At5g56030	HSP81-2 (HEAT SHOCK PROTEIN 81-2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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