CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1607125_at

Gene name hypothetical protein LOC100242557

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1607125_at CB342111 hypothetical protein LOC100242557 - 8e-2 At5g26820 ATIREG3 (IRON-REGULATED PROTEIN 3) S.X. H.G.
0.80 93.6 1619317_at CF516706 hypothetical protein LOC100250509 - 4e-125 At5g42270 VAR1 (VARIEGATED 1) S.X. H.G.
0.60 81.9 1620190_at CA817971 hypothetical protein LOC100267159 - 1e-16 At5g13720 - S.X. H.G.
0.40 57.7 1615234_at CB342968 hypothetical protein LOC100258729 - 3e-17 At1g54350 ABC transporter family protein S.X. H.G.
0.36 50.7 1620973_s_at BQ798594 hypothetical protein LOC100265749 - 4e+0 At3g22415 unknown protein S.X. H.G.
0.21 24.0 1611683_s_at BQ799199 similar to A_IG002N01.31 gene product - 1e-30 At4g01050 hydroxyproline-rich glycoprotein family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.8 98.6 GSM147719 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 48
5.0 98.0 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
4.0 96.7 GSM147725 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 54
3.9 96.6 GSM147737 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 66
3.8 96.4 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
3.7 96.2 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
3.7 96.2 GSM147724 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 53
3.6 96.0 GSM147731 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 60
3.0 94.2 GSM147735 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 64
2.9 93.8 GSM147716 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 45
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 32 1619768_at CB003377 - - 1e-7 At5g46210 CUL4 (CULLIN4) C.G. S.X.
0.01 2e+0 32 1619574_at CB343067 hypothetical protein LOC100265787 - 4e-18 At4g35050 MSI3 (MULTICOPY SUPPRESSOR OF IRA1 3) C.G. S.X.
0.02 2e+0 32 1607090_at CB003377 - - 1e-7 At5g46210 CUL4 (CULLIN4) C.G. S.X.
0.03 6e+0 30 1622618_at CF414579 hypothetical protein LOC100255769 - 1e-1 At5g35475 - C.G. S.X.
0.02 6e+0 30 1622495_at BM436258 hypothetical protein LOC100248841 - 4e-26 At1g74970 RPS9 (RIBOSOMAL PROTEIN S9) C.G. S.X.
0.02 6e+0 30 1622300_at CB008253 - - 1e-3 At4g32285 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related C.G. S.X.
0.02 6e+0 30 1615229_at CD713070 - - 3e-1 At2g30050 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.02 6e+0 30 1613658_at CD801951 hypothetical protein LOC100244785 - 4e-4 At2g02970 nucleoside phosphatase family protein / GDA1/CD39 family protein C.G. S.X.
0.01 6e+0 30 1613011_at CD712480 hypothetical protein LOC100241016 /// hypothetical LOC100246119 - 5e-60 At3g54540 ATGCN4 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-2 38 Arabidopsis thaliana At5g26820 832740 ATIREG3 (IRON-REGULATED PROTEIN 3) F:unknown;P:unknown;C:membrane;MPFOB - - - C.G. S.X.
0.13 6e-22 105 Glycine max Gma.18067.1.S1_at BM178502 - - 3e+0 At5g26820 ATIREG3 (IRON-REGULATED PROTEIN 3) C.G. S.X.
0.11 3e-12 71 Hordeum vulgare Contig10939_at Contig10939 - - 2e+0 At4g35210 unknown protein C.G. S.X.
0.07 1e-17 91 Oryza sativa Os12g0562100 AK064831.1 - Conserved hypothetical protein 1e+0 At5g53110 - C.G. S.X.
0.19 8e-77 287 Populus trichocarpa PtpAffx.215916.1.S1_at pmrna30384 ferroportin protein family - 4e-9 At5g26820 ATIREG3 (IRON-REGULATED PROTEIN 3) C.G. S.X.
0.06 2e-9 63 Triticum aestivum TaAffx.8755.1.S1_at CA620645 - - 3e-1 At3g06780 glycine-rich protein C.G. S.X.
0.03 6e-1 34 Zea mays Zm.18828.1.A1_at CO527515 - - 3e-1 At2g21660 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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