Gene omics information

Query gene ID	1607055_at
Gene name	hypothetical protein LOC100264430
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1607055_at	CB004334	hypothetical protein LOC100264430	-	2e-2	At1g44790	ChaC-like family protein	S.X.	H.G.	Please select
0.83	94.6	1615149_at	CD009120	hypothetical protein LOC100248175	-	4e+0	At5g64200	ATSC35	S.X.	H.G.	Please select
0.80	93.6	1620133_at	CA816897	hypothetical protein LOC100256241	-	3e-2	At4g13220	unknown protein	S.X.	H.G.	Please select
0.57	79.8	1611683_s_at	BQ799199	similar to A_IG002N01.31 gene product	-	1e-30	At4g01050	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.50	72.7	1607640_at	CF215061	hypothetical protein LOC100249595	-	1e-19	At1g65260	PTAC4 (PLASTID TRANSCRIPTIONALLY ACTIVE4)	S.X.	H.G.	Please select
0.47	67.7	1607276_at	CF202469.1	-	-	1e-13	At3g23400	plastid-lipid associated protein PAP / fibrillin family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.5	95.7	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
3.4	95.5	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
3.3	95.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.3	95.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
3.2	94.9	GSM147714	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	43
3.2	94.9	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
2.9	93.8	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.8	93.4	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.8	93.4	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.8	93.4	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1380	1610905_at	CB004334	-	-	2e-2	At1g44790	ChaC-like family protein	C.G.	S.X.	Please select
0.03	3e-2	38	1616585_at	CB349358	hypothetical protein LOC100254351	-	5e-27	At1g24360	3-oxoacyl-(acyl-carrier protein) reductase, chloroplast / 3-ketoacyl-acyl carrier protein reductase	C.G.	S.X.	Please select
0.02	4e-1	34	1610480_at	CA809362	hypothetical protein LOC100254239	-	3e-9	At1g56010	NAC1	C.G.	S.X.	Please select
0.01	2e+0	32	1622010_at	CF207538	similar to RNA polymerase alpha subunit	-	0	Atcg00740	-	C.G.	S.X.	Please select
0.02	2e+0	32	1620195_at	CB347615	hypothetical protein LOC100254082	-	4e-33	At1g76010	nucleic acid binding	C.G.	S.X.	Please select
0.03	2e+0	32	1617543_at	BQ794677	hypothetical protein LOC100246698	-	2e-8	At3g26850	-	C.G.	S.X.	Please select
0.03	2e+0	32	1617074_s_at	CF204027.1	similar to Os04g0237300 /// similar to RNA polymerase alpha subunit /// similar to RNA polymerase alpha subunit	-	3e-128	Atcg00750	-	C.G.	S.X.	Please select
0.02	2e+0	32	1617107_at	CD712747	-	-	4e-1	At4g01735	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	1616721_at	CF608439	hypothetical protein LOC100260478	-	1e+0	At5g08150	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	2e-2	40	Arabidopsis thaliana	At1g44790	841043	ChaC-like family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.25	4e-14	79	Glycine max	Gma.13488.2.A1_at	CD399125	-	-	1e-2	At1g44790	ChaC-like family protein	C.G.	S.X.	Please select
0.07	3e+0	32	Hordeum vulgare	Contig8561_at	Contig8561	-	-	1e-4	At4g31290	ChaC-like family protein	C.G.	S.X.	Please select
0.03	1e+1	32	Oryza sativa	Os11g0573200	AK059001.1	-	Gag polyprotein (Fragment)	3e+0	At3g15780	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.46	8e-43	174	Populus trichocarpa	Ptp.5830.1.S1_at	CV255078	hypothetical protein	-	2e-6	At1g44790	ChaC-like family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	34	Triticum aestivum	TaAffx.106701.1.S1_at	CA713385	-	-	1e-1	At3g50550	unknown protein	C.G.	S.X.	Please select
0.05	1e-1	36	Zea mays	Zm.7963.1.A1_at	CK348034	cation transport protein chaC	-	1e-1	At1g72080	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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