Gene omics information

Query gene ID 1606956_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.81606956_atCB008850--4e-20At5g56660ILL2S.X.H.G.
0.5072.71617898_atCF605263hypothetical protein LOC100244372-3e-1At5g49610F-box family proteinS.X.H.G.
0.4057.71612066_atCF607715beclin 1 protein-5e-48At3g61710autophagy protein Apg6 familyS.X.H.G.
0.1920.9AFFX-Vvi-actin-5_at-actin 1-0S.X.H.G.
0.099.41614631_atCB979660hypothetical protein LOC100254376-1e-137At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)S.X.H.G.
0.077.81614395_atCD715548--3e-1At1g19380unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.499.6GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
7.199.1GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
6.598.9GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
6.498.9GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
5.698.4GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
4.497.3GSM436405V. riparia (VR, PI588259) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
4.397.2GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
4.297.1GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
4.196.9GSM287877Green hard berry B12 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
4.096.7GSM287904Red soft berry C31 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.97013381619610_atCB008850hypothetical protein LOC100262106-4e-20At5g56660ILL2C.G.S.X.
0.013e-2381622249_atCA817903glycolate oxidase-like-6e-153At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.035e-1341621856_atCF516490hypothetical protein LOC100251400-2e-12At1g51760IAR3 (IAA-ALANINE RESISTANT 3)C.G.S.X.
0.025e-1341618083_atCD719387--5e-3At5g21430DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.025e-1341614293_atCD719387hypothetical protein LOC100257708-5e-3At5g21430DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.022e+0321620505_atZ54234.1chitinase class I-2e-3At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.002e+0321620102_atCF514700--0Atcg00540-C.G.S.X.
0.022e+0321617430_s_atZ54234.1chitinase class I-2e-3At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.002e+0321615099_s_atCB970583hypothetical protein LOC100242764 /// similar to cytochrome f-0Atcg00540-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.164e-2099Arabidopsis thalianaAt5g56660835767ILL2encodes IAA-amino acid hydrolase that has a broad range of substrate specificity. It is most active on IAA-Ala among the IAA-conjugate hydrolases tested.---C.G.S.X.
0.314e-39163Glycine maxGmaAffx.32773.1.S1_atBM527598--1e-8At5g56650ILL1C.G.S.X.
0.059e-754Hordeum vulgareContig7041_atContig7041--2e-7At1g51760IAR3 (IAA-ALANINE RESISTANT 3)C.G.S.X.
0.079e-446Oryza sativaOs01g0560000AY187620.1-Auxin conjugate hydrolase (ILL5)2e-4At1g51780ILL5C.G.S.X.
0.466e-41169Populus trichocarpaPtpAffx.208401.1.S1_atpmrna16701iaa-amino acid hydrolase 10-3e-21At5g56660ILL2C.G.S.X.
0.081e-448Triticum aestivumTaAffx.77838.1.S1_atCA741949--7e-8At3g02875ILR1 (IAA-LEUCINE RESISTANT 1)C.G.S.X.
0.072e-756Zea maysZm.16472.2.S1_atAI666038hypothetical protein LOC100274316-1e-15At1g51760IAR3 (IAA-ALANINE RESISTANT 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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