CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1606814_at

Gene name hypothetical protein LOC100246736

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 81.9 1606814_at CF372213 hypothetical protein LOC100246736 - 1e-12 At5g60020 LAC17 (laccase 17) S.X. H.G.
0.36 50.7 1606524_at CB979170 hypothetical protein LOC100266440 - 2e-19 At3g01810 - S.X. H.G.
0.31 41.3 1620603_at CF515961 hypothetical protein LOC100256346 - 2e-43 At3g55760 unknown protein S.X. H.G.
0.23 27.5 1613318_at BQ799524 sucrose responsive element binding protein - 2e-10 At4g37260 MYB73 (MYB DOMAIN PROTEIN 73) S.X. H.G.
0.21 24.0 1610669_at CF208675 hypothetical protein LOC100259403 - 6e-2 At1g69825 - S.X. H.G.
0.16 16.7 1622787_at CF607318 hypothetical protein LOC100244878 - 4e-19 At5g62500 ATEB1B (END BINDING PROTEIN 1B) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.3 99.8 GSM436428 V. riparia (VR, PI588259) SD, 13h 42 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
7.9 99.3 GSM436427 V. riparia (VR, PI588259) SD, 13h 42 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.8 97.8 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.7 97.7 GSM436429 V. riparia (VR, PI588259) SD, 13h 42 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.6 97.6 GSM436425 V. riparia (VR, PI588259) SD, 13h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.2 97.1 GSM436424 V. riparia (VR, PI588259) SD, 13h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.1 96.9 GSM436408 V. riparia (VR, PI588259) LD, 15h 42 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.5 95.7 GSM436347 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436406 V. riparia (VR, PI588259) LD, 15h 42 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436426 V. riparia (VR, PI588259) SD, 13h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 8e-5 46 1615213_at CB973850 hypothetical protein LOC100258642 - 2e-2 At5g03260 LAC11 (laccase 11) C.G. S.X.
0.06 1e-3 42 1607667_at CF212686 hypothetical protein LOC100240808 - 3e-32 At5g01190 LAC10 (laccase 10) C.G. S.X.
0.03 3e-1 34 1617186_at CF415580 hypothetical protein LOC100264918 - 1e-30 At5g35790 G6PD1 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 1) C.G. S.X.
0.03 3e-1 34 1614322_at CB834359 - - 3e-1 At5g17460 unknown protein C.G. S.X.
0.03 3e-1 34 1610550_at CB834359 - - 3e-1 At5g17460 unknown protein C.G. S.X.
0.02 3e-1 34 1607469_at CB977637 hypothetical protein LOC100261135 - 2e-10 At3g17980 C2 domain-containing protein C.G. S.X.
0.04 1e+0 32 1614497_at CB001608 - - 3e+0 At3g52980 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.02 1e+0 32 1614427_at CB974176 - - 7e+0 At5g37055 SEF (SERRATED LEAVES AND EARLY FLOWERING) C.G. S.X.
0.01 1e+0 32 1612185_at CB008768 hypothetical protein LOC100245556 - 3e-10 At5g66460 (1-4)-beta-mannan endohydrolase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 1e-12 73 Arabidopsis thaliana At5g60020 836124 LAC17 (laccase 17) putative laccase, a member of laccase family of genes (17 members in Arabidopsis). - - - C.G. S.X.
0.09 1e+0 34 Glycine max Gma.1614.1.S1_at BQ297988 - - 8e-1 At3g53740 60S ribosomal protein L36 (RPL36B) C.G. S.X.
0.07 5e-4 44 Hordeum vulgare Contig18837_at Contig18837 - - 3e-4 At5g60020 LAC17 (laccase 17) C.G. S.X.
0.08 5e-7 56 Oryza sativa Os12g0258700 BI813311 - Multicopper oxidase, type 1 domain containingprotein 1e-3 At5g05390 LAC12 (laccase 12) C.G. S.X.
0.22 1e-31 137 Populus trichocarpa PtpAffx.224877.1.S1_at pmrna43778 hypothetical protein - 2e-10 At2g46570 LAC6 (laccase 6) C.G. S.X.
0.10 4e-3 42 Triticum aestivum TaAffx.37473.1.S1_at BJ277445 - - 1e-2 At2g29130 LAC2 (laccase 2) C.G. S.X.
0.06 1e-4 46 Zea mays Zm.16572.1.A1_at CF650018 - - 5e+0 At2g27228 CPuORF6 (Conserved peptide upstream open reading frame 6) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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