CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1606807_at

Gene name hypothetical protein LOC100264697

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1606807_at BQ794559 hypothetical protein LOC100264697 - 7e-21 At5g11710 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related S.X. H.G.
0.91 98.8 1609942_at CF210968 hypothetical protein LOC100262467 - 5e+0 At5g67580 TRB2 S.X. H.G.
0.71 89.5 1615411_s_at BQ799375 hypothetical protein LOC100266324 - 3e-4 At1g43130 LCV2 (LIKE COV 2) S.X. H.G.
0.67 87.9 1613621_s_at CD721086 hypothetical protein LOC100246359 - 3e-1 At5g58412 - S.X. H.G.
0.50 72.7 1611974_at CF208396 hypothetical protein LOC100258926 - 9e-27 At2g15430 NRPB3 S.X. H.G.
0.48 68.8 1608155_at CF210980 hypothetical protein LOC100252195 - 1e-31 At4g34460 AGB1 (GTP BINDING PROTEIN BETA 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.3 97.2 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.0 96.7 GSM436349 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.3 95.2 GSM436346 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436369 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436347 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436348 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM436350 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436368 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436355 Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 32 1622411_at CD720244 - - 2e-21 At4g33060 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein C.G. S.X.
0.02 2e+0 32 1621611_at CF609382 similar to Os01g0971100 - 1e-1 At3g47680 DNA binding C.G. S.X.
0.03 2e+0 32 1618691_at CF372335 - - 4e-3 At3g60800 zinc finger (DHHC type) family protein C.G. S.X.
0.04 2e+0 32 1618461_x_at CF202534.1 - - 1e+1 At4g22517 - C.G. S.X.
0.02 2e+0 32 1618594_at CD720244 hypothetical protein LOC100267905 - 2e-21 At4g33060 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein C.G. S.X.
0.03 2e+0 32 1617621_at CF208003 - - 2e+0 At2g02520 - C.G. S.X.
0.04 2e+0 32 1616544_at CF202534.1 - - 1e+1 At4g22517 - C.G. S.X.
0.01 2e+0 32 1616002_s_at CB345569 hypothetical protein LOC100262354 - 2e-100 At2g21330 fructose-bisphosphate aldolase, putative C.G. S.X.
0.02 2e+0 32 1608406_at BQ798813 hypothetical protein LOC100266794 - 2e-52 At2g02180 TOM3 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 7e-21 101 Arabidopsis thaliana At5g11710 831043 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related EPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues. - - - C.G. S.X.
0.14 9e-12 71 Glycine max Gma.6833.1.S1_at BU545297 - - 9e-12 At5g11710 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related C.G. S.X.
0.11 2e-4 46 Hordeum vulgare HX02J06u_s_at HX02J06u - - 5e-3 At5g11710 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related C.G. S.X.
0.03 5e-5 50 Oryza sativa Os04g0599900 AK121748.1 - ENTH1 protein (Fragment) 2e-5 At5g11710 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related C.G. S.X.
0.12 6e-22 105 Populus trichocarpa PtpAffx.110191.1.S1_s_at CN518114 hypothetical protein - 6e-21 At5g11710 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related C.G. S.X.
0.03 4e-1 36 Triticum aestivum TaAffx.40577.1.S1_at CA743022 - - 4e+0 At5g38290 peptidyl-tRNA hydrolase family protein C.G. S.X.
0.03 2e+0 32 Zea mays Zm.2221.1.S1_at AW324591 hypothetical protein LOC100276340 - 2e-1 At5g55570 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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