CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1606797_at

Gene name similar to 50S ribosomal protein L17, chloroplastic

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1606797_at CD714405 similar to 50S ribosomal protein L17, chloroplastic - 3e-8 At3g54210 ribosomal protein L17 family protein S.X. H.G.
0.67 87.9 1614655_at CB969062 hypothetical protein LOC100267459 - 2e-61 At5g45930 CHLI2 (MAGNESIUM CHELATASE I2) S.X. H.G.
0.55 77.3 1610546_at CB976033 similar to Os12g0541500 - 1e-35 At4g29060 emb2726 (embryo defective 2726) S.X. H.G.
0.55 77.3 1615609_at CB971917 hypothetical protein LOC100268043 - 1e-11 At3g25920 RPL15 S.X. H.G.
0.50 72.7 1610716_at CF211147 hypothetical protein LOC100265925 - 5e-16 At3g15190 chloroplast 30S ribosomal protein S20, putative S.X. H.G.
0.39 54.9 1607287_a_at CA817984 hypothetical protein LOC100248273 - 3e-16 At3g56910 PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.2 98.2 GSM147726 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 55
4.7 97.7 GSM147714 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 43
4.2 97.1 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
4.1 96.9 GSM147715 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 44
4.0 96.7 GSM147727 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 56
3.9 96.6 GSM147738 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 67
3.9 96.6 GSM147733 Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation 62
3.9 96.6 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
3.8 96.4 GSM147720 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 49
3.8 96.4 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-1 36 1618563_at CA817076 hypothetical protein LOC100267134 - 3e-7 At2g41040 methyltransferase-related C.G. S.X.
0.02 6e-1 34 1607577_at CF207752 hypothetical protein LOC100246008 - 4e-1 At2g39560 unknown protein C.G. S.X.
0.02 2e+0 32 1622737_at CF512321 - - 1e-56 At5g22880 HTB2 C.G. S.X.
0.01 2e+0 32 1622173_at CD719685 - - 3e-6 At5g12020 HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) C.G. S.X.
0.02 2e+0 32 1619140_at CF606031 hypothetical protein LOC100246049 - 4e-4 At2g35270 DNA-binding protein-related C.G. S.X.
0.01 2e+0 32 1618391_at CD719685 - - 3e-6 At5g12020 HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) C.G. S.X.
0.02 2e+0 32 1618101_at CF405874 hypothetical protein LOC100259048 - 9e-2 At3g44590 60S acidic ribosomal protein P2 (RPP2D) C.G. S.X.
0.01 2e+0 32 1615346_at BQ798326 hypothetical protein LOC100246049 - 2e-7 At1g72160 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein C.G. S.X.
0.01 2e+0 32 1611997_at CA812801 hypothetical protein LOC100249691 - 4e-2 At5g55660 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 3e-8 59 Arabidopsis thaliana At3g54210 824588 ribosomal protein L17 family protein F:structural constituent of ribosome;P:translation;C:ribosome, chloroplast;BOMFP - - - C.G. S.X.
0.34 5e-82 305 Glycine max Gma.1355.1.S1_a_at BU545782 - - 1e-4 At3g54210 ribosomal protein L17 family protein C.G. S.X.
0.20 7e-20 97 Hordeum vulgare Contig10356_at Contig10356 - - 1e-13 At3g54210 ribosomal protein L17 family protein C.G. S.X.
0.21 1e-15 85 Oryza sativa Os03g0815400 AK067057.1 - Ribosomal protein L17 family protein 1e-4 At3g54210 ribosomal protein L17 family protein C.G. S.X.
0.35 1e-54 214 Populus trichocarpa PtpAffx.49598.1.A1_s_at CV278478 - - 5e-3 At3g54210 ribosomal protein L17 family protein C.G. S.X.
0.11 2e-15 83 Triticum aestivum Ta.20947.1.S1_a_at CA623740 - - 2e-6 At3g54210 ribosomal protein L17 family protein C.G. S.X.
0.13 4e-18 91 Zea mays Zm.15067.1.S1_at BG873877 hypothetical protein LOC100274150 - 3e-2 At3g54210 ribosomal protein L17 family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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