Gene omics information

Query gene ID	1606705_at
Gene name	hypothetical protein LOC100265189
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	72.7	1606705_at	CD721559	hypothetical protein LOC100265189	-	2e-5	At3g13310	DNAJ heat shock N-terminal domain-containing protein	S.X.	H.G.	Please select
0.71	89.5	1620725_at	BQ795649	hypothetical protein LOC100249240	-	4e-1	At4g37445	-	S.X.	H.G.	Please select
0.56	79.4	1607804_at	CB004035	-	-	2e-45	At1g16270	protein kinase family protein	S.X.	H.G.	Please select
0.53	75.2	1609762_s_at	CD712929	hypothetical protein LOC100257013	-	4e-19	At1g16270	protein kinase family protein	S.X.	H.G.	Please select
0.53	75.2	1611013_at	CF518927	hypothetical protein LOC100243798	-	4e-1	At5g22890	zinc finger (C2H2 type) family protein	S.X.	H.G.	Please select
0.47	67.7	1618716_at	CB917669	similar to Os06g0665100	-	1e-22	At5g44730	haloacid dehalogenase-like hydrolase family protein	S.X.	H.G.	Please select
0.42	60.1	1621277_at	CF369061	hypothetical protein LOC100252641	-	2e-24	At1g72820	mitochondrial substrate carrier family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
18.2	99.9	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
17.6	99.9	GSM299454	B_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
13.7	99.8	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
11.8	99.8	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
10.3	99.6	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
8.8	99.5	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
8.8	99.5	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
7.5	99.2	GSM299462	D_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
7.3	99.2	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.5	98.9	GSM299460	D_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	6e-3	40	1621230_at	CF605781	hypothetical protein LOC100243742	-	4e-1	At2g17880	DNAJ heat shock protein, putative	C.G.	S.X.	Please select
0.04	6e-3	40	1608620_at	CF605781	-	-	4e-1	At2g17880	DNAJ heat shock protein, putative	C.G.	S.X.	Please select
0.02	4e-1	34	1620520_s_at	BQ797142	hypothetical protein LOC100252105	-	2e-23	At3g62600	ATERDJ3B	C.G.	S.X.	Please select
0.02	2e+0	32	1622442_at	CD714783	-	-	8e-12	At5g06430	thioredoxin-related	C.G.	S.X.	Please select
0.02	2e+0	32	1618618_at	CD714783	hypothetical protein LOC100255850	-	8e-12	At5g06430	thioredoxin-related	C.G.	S.X.	Please select
0.02	2e+0	32	1617059_at	CF607205	hypothetical protein LOC100265743	-	4e-1	At5g59510	RTFL5 (ROTUNDIFOLIA LIKE 5)	C.G.	S.X.	Please select
0.02	2e+0	32	1615432_at	CF518729	hypothetical protein LOC100258784	-	3e-9	At3g47850	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	1613848_at	CF568786	-	-	4e-9	At3g55520	immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative	C.G.	S.X.	Please select
0.02	2e+0	32	1613703_at	BQ800381	hypothetical protein LOC100241006	-	5e-13	At3g55520	immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.11	2e-5	50	Arabidopsis thaliana	At3g13310	820531	DNAJ heat shock N-terminal domain-containing protein	F:unfolded protein binding, heat shock protein binding;P:protein folding;C:unknown;BOMFPAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.11	3e-5	50	Glycine max	GmaAffx.48438.1.S1_at	AW350858	-	-	4e+0	At2g17880	DNAJ heat shock protein, putative	C.G.	S.X.	Please select
0.03	1e-2	40	Hordeum vulgare	Contig7941_s_at	Contig7941	-	-	2e+0	At3g28950	avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related	C.G.	S.X.	Please select
0.03	6e-1	36	Oryza sativa	OsAffx.25169.1.S1_s_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.12	2e-3	44	Populus trichocarpa	PtpAffx.249.600.S1_s_at	CV240351	hypothetical protein	-	4e-1	At3g13310	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	34	Triticum aestivum	TaAffx.84777.1.S1_at	CA629405	-	-	4e+0	At5g65410	HB25 (HOMEOBOX PROTEIN 25)	C.G.	S.X.	Please select
0.04	2e+0	32	Zea mays	ZmAffx.1051.1.A1_at	AI881809	-	-	2e-1	At3g01790	ribosomal protein L13 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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