Gene omics information

Query gene ID	1606524_at
Gene name	hypothetical protein LOC100266440
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	72.7	1606524_at	CB979170	hypothetical protein LOC100266440	-	2e-19	At3g01810	-	S.X.	H.G.	Please select
0.67	87.9	1607622_at	CF404670	hypothetical protein LOC100265082	-	8e-17	At2g17370	HMG2 (3-HYDROXY-3-METHYLGLUTARYL-COA REDUCTASE 2)	S.X.	H.G.	Please select
0.50	72.7	1622787_at	CF607318	hypothetical protein LOC100244878	-	4e-19	At5g62500	ATEB1B (END BINDING PROTEIN 1B)	S.X.	H.G.	Please select
0.50	72.7	1616050_at	CF373308	hypothetical protein LOC100244878	-	9e+0	At5g06280	unknown protein	S.X.	H.G.	Please select
0.46	66.5	1620603_at	CF515961	hypothetical protein LOC100256346	-	2e-43	At3g55760	unknown protein	S.X.	H.G.	Please select
0.13	13.3	1610669_at	CF208675	hypothetical protein LOC100259403	-	6e-2	At1g69825	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.3	99.6	GSM436429	V. riparia (VR, PI588259) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
8.5	99.4	GSM436428	V. riparia (VR, PI588259) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
6.9	99.1	GSM436427	V. riparia (VR, PI588259) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
5.2	98.2	GSM436424	V. riparia (VR, PI588259) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.2	97.1	GSM436406	V. riparia (VR, PI588259) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.2	97.1	GSM436425	V. riparia (VR, PI588259) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.0	96.7	GSM436408	V. riparia (VR, PI588259) LD, 15h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.6	96.0	GSM436426	V. riparia (VR, PI588259) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436421	V. riparia (VR, PI588259) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	8e-1	34	1621430_at	BQ795297	hypothetical protein LOC100249442	-	2e-30	At5g18940	Mo25 family protein	C.G.	S.X.	Please select
0.01	3e+0	32	1620985_at	CB348258	hypothetical protein LOC100267630	-	3e-11	At4g27670	HSP21 (HEAT SHOCK PROTEIN 21)	C.G.	S.X.	Please select
0.01	3e+0	32	1620064_at	CF211420	hypothetical protein LOC100251825	-	3e-58	At3g55260	HEXO1 (BETA-HEXOSAMINIDASE 1)	C.G.	S.X.	Please select
0.02	3e+0	32	1617581_at	CF514948	-	-	4e+0	At4g07940	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	1617149_at	CF415849	-	-	2e-2	At1g09645	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	1614892_at	CF511230	-	-	1e+0	At5g29000	myb family transcription factor	C.G.	S.X.	Please select
0.02	3e+0	32	1612177_at	CD798227	-	-	3e+0	At3g63210	MARD1	C.G.	S.X.	Please select
0.01	3e+0	32	1610299_at	CF373165	hypothetical protein LOC100243241	-	2e-3	At1g24020	MLP423 (MLP-LIKE PROTEIN 423)	C.G.	S.X.	Please select
0.01	1e+1	30	1622679_at	CD798070	hypothetical protein LOC100257992	-	1e-20	At5g06220	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	2e-19	97	Arabidopsis thaliana	At3g01810	821073	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMFBPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.24	4e-37	157	Glycine max	GmaAffx.71462.1.S1_at	BM308753	-	-	5e-6	At5g43230	unknown protein	C.G.	S.X.	Please select
0.07	9e-8	57	Hordeum vulgare	Contig19475_at	Contig19475	-	-	2e-9	At2g42320	nucleolar protein gar2-related	C.G.	S.X.	Please select
0.10	2e-2	42	Oryza sativa	Os.7004.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.34	3e-47	190	Populus trichocarpa	PtpAffx.208241.1.S1_s_at	pmrna16404	hypothetical protein	-	1e-20	At5g43230	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	3e+0	34	Triticum aestivum	TaAffx.27350.1.S1_at	CA677998	-	-	8e+0	At4g26430	CSN6B	C.G.	S.X.	Please select
0.06	1e-3	44	Zea mays	Zm.2972.1.A1_at	BM073882	-	-	4e-3	At3g01810	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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