Gene omics information

Query gene ID	1606505_at
Gene name	hypothetical protein LOC100257948
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1606505_at	CB970568	hypothetical protein LOC100257948	-	3e+0	At3g21570	unknown protein	S.X.	H.G.	Please select
0.73	90.8	AFFX-Vvi-X03453-2_s_at	-	-	-	0			S.X.	H.G.	Please select
0.73	90.8	AFFX-r2-P1-cre-3_at	AFFX-r2-P1-cre-3	-	-	0			S.X.	H.G.	Please select
0.73	90.8	AFFX-r2-P1-cre-5_at	AFFX-r2-P1-cre-5	-	-	0			S.X.	H.G.	Please select
0.73	90.8	AFFX-CreX-3_at	AFFX-CreX-3	-	-	0			S.X.	H.G.	Please select
0.61	83.2	AFFX-CreX-5_at	AFFX-CreX-5	-	-	0			S.X.	H.G.	Please select
0.47	67.7	AFFX-r2-Ec-bioD-5_at	AFFX-r2-Ec-bioD-5	-	-	0			S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.8	93.4	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436417	V. riparia (VR, PI588259) SD, 13h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436392	V. riparia (VR, PI588259) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436391	V. riparia (VR, PI588259) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436393	V. riparia (VR, PI588259) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436406	V. riparia (VR, PI588259) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436411	V. riparia (VR, PI588259) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	8e-1	34	1622863_at	BQ799387	hypothetical protein LOC100263074	-	4e+0	At5g56100	glycine-rich protein / oleosin	C.G.	S.X.	Please select
0.02	8e-1	34	1622833_at	CB914653	-	-	4e+0	At4g10767	SCRL21 (SCR-Like 21)	C.G.	S.X.	Please select
0.02	8e-1	34	1619021_at	CB914653	-	-	4e+0	At4g10767	SCRL21 (SCR-Like 21)	C.G.	S.X.	Please select
0.01	8e-1	34	1610936_at	CB972355	hypothetical protein LOC100259946	-	2e-1	At3g14870	unknown protein	C.G.	S.X.	Please select
0.02	8e-1	34	1609095_at	CF405648	hypothetical protein LOC100241542	-	4e-1	At5g41960	unknown protein	C.G.	S.X.	Please select
0.01	3e+0	32	1621254_at	BQ795836	-	-	5e-4	At2g18770	signal recognition particle binding	C.G.	S.X.	Please select
0.02	3e+0	32	1620741_at	CB972037	hypothetical protein LOC100243299	-	2e-2	At5g58270	STA1 (STARIK 1)	C.G.	S.X.	Please select
0.01	3e+0	32	1618036_at	CF403594	hypothetical protein LOC100264427	-	6e-4	At2g42390	protein kinase C substrate, heavy chain-related	C.G.	S.X.	Please select
0.02	3e+0	32	1617918_at	CF568942	-	-	8e-26	At4g29190	zinc finger (CCCH-type) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e+0	34	Arabidopsis thaliana	At3g21570	821711	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	1e-6	56	Glycine max	Gma.6227.1.S1_at	AW099852	-	-	2e-1	At3g24650	ABI3 (ABA INSENSITIVE 3)	C.G.	S.X.	Please select
0.02	5e+0	32	Hordeum vulgare	HW07G01u_x_at	HW07G01u	-	-	6e-1	At5g49120	senescence-associated protein-related	C.G.	S.X.	Please select
0.02	8e-2	40	Oryza sativa	Os03g0831600	NM_185081.1	-	-	5e-3	At2g42990	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	6e-8	59	Populus trichocarpa	PtpAffx.1408.1.A1_s_at	BP935758	hypothetical protein	-	6e-4	At3g21570	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e+0	34	Triticum aestivum	Ta.6021.3.S1_at	CA665329	-	-	7e-2	At5g61710	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Zea mays	Zm.9141.1.A1_at	BM341293	-	-	7e+0	At5g52190	sugar isomerase (SIS) domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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