Gene omics information

Query gene ID	1606482_at
Gene name	hypothetical protein LOC100243077
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	93.6	1606482_at	BQ796112	hypothetical protein LOC100243077	-	3e-10	At3g44830	lecithin:cholesterol acyltransferase family protein / LACT family protein	S.X.	H.G.	Please select
0.91	98.8	1616147_at	CF404954	hypothetical protein LOC100243192	-	2e-6	At2g26800	hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative	S.X.	H.G.	Please select
0.67	87.9	1612185_at	CB008768	hypothetical protein LOC100245556	-	3e-10	At5g66460	(1-4)-beta-mannan endohydrolase, putative	S.X.	H.G.	Please select
0.55	77.3	1620050_at	CB009432	hypothetical protein LOC100244027	-	1e-5	At5g17500	glycosyl hydrolase family 5 protein / cellulase family protein	S.X.	H.G.	Please select
0.50	72.7	1615374_at	CB911656	hypothetical protein LOC100241955	-	8e-1	At1g34000	OHP2 (ONE-HELIX PROTEIN 2)	S.X.	H.G.	Please select
0.38	53.6	1610428_at	CD012983	hypothetical protein LOC100263040	-	2e-4	At1g32090	early-responsive to dehydration protein-related / ERD protein-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
14.8	99.9	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
12.9	99.8	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
12.5	99.8	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
9.8	99.6	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
9.5	99.6	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
8.3	99.4	GSM287904	Red soft berry C31 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
7.8	99.3	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
7.6	99.3	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
7.5	99.2	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
7.3	99.2	GSM287894	Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-2	38	1609211_at	BQ795995	hypothetical protein LOC100250808	-	6e-5	At2g33490	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.03	3e-1	34	1620914_at	BQ798443	hypothetical protein LOC100267475	-	2e-3	At1g25550	myb family transcription factor	C.G.	S.X.	Please select
0.02	1e+0	32	1620395_s_at	CF214765	hypothetical protein LOC100263635	-	4e-94	At5g03290	isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative	C.G.	S.X.	Please select
0.02	1e+0	32	1619155_at	CF213888	-	-	7e-18	At3g21140	FMN binding	C.G.	S.X.	Please select
0.02	1e+0	32	1618779_at	CF514080	hypothetical protein LOC100261165	-	3e-14	At4g31360	selenium binding	C.G.	S.X.	Please select
0.03	1e+0	32	1606830_at	CF201217.1	-	-	4e-22	At3g09810	isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative	C.G.	S.X.	Please select
0.02	5e+0	30	1622866_at	CD800356	hypothetical protein LOC100259638	-	3e-8	At4g14385	-	C.G.	S.X.	Please select
0.03	5e+0	30	1621507_s_at	AY256862.1	GAI1	-	6e-5	At3g03450	RGL2 (RGA-LIKE 2)	C.G.	S.X.	Please select
0.02	5e+0	30	1621093_at	CB343061	hypothetical protein LOC100267532	-	2e-16	At1g61260	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	3e-10	65	Arabidopsis thaliana	At3g44830	823617	lecithin:cholesterol acyltransferase family protein / LACT family protein	F:phosphatidylcholine-sterol O-acyltransferase activity;P:lipid metabolic process;C:cellular_component unknown;MFPOB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	34	Glycine max	PsAffx.CL759Contig1_at	PsAffx.CL759Contig1	-	-	2e+1	Atmg01250	-	C.G.	S.X.	Please select
0.04	8e+0	30	Hordeum vulgare	HVSMEb0012O04f_at	HVSMEb0012O04f	-	-	1e-1	At2g40580	protein kinase family protein	C.G.	S.X.	Please select
0.06	4e-5	50	Oryza sativa	Os09g0444200	AK099811.1	-	Lecithin:cholesterol acyltransferase familyprotein	9e-30	At5g13640	ATPDAT	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.18	1e-41	171	Populus trichocarpa	PtpAffx.222430.1.S1_at	pmrna39826	hypothetical protein	-	1e-39	At3g44830	lecithin:cholesterol acyltransferase family protein / LACT family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	3e-4	46	Triticum aestivum	Ta.25251.1.S1_at	CD373624	-	-	2e-20	At5g13640	ATPDAT	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	ZmAffx.111.1.A1_at	AI665574	-	-	3e+0	At5g57565	protein kinase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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