Gene omics information

Query gene ID 1606368_s_at
Gene name actin 1
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.81606368_s_atCF208516actin 1-0At5g09810ACT7 (ACTIN 7)S.X.H.G.
0.9198.8AFFX-Vvi-actin-3_s_at-actin 1-0S.X.H.G.
0.8093.6AFFX-Vvi-actin-3_c6_s_at-actin 1-0S.X.H.G.
0.7390.8AFFX-Vvi-actin-3_c7_s_at-actin 1-0S.X.H.G.
0.7189.5AFFX-Vvi-actin-3_c2_s_at-actin 1-0S.X.H.G.
0.4464.11611412_atCF517248hypothetical protein LOC100244694-2e+0At5g37480unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1.683.3GSM436353Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
1.581.7GSM436415V. riparia (VR, PI588259) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
1.581.7GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
1.581.7GSM436417V. riparia (VR, PI588259) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
1.581.7GSM436360Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
1.581.7GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63
1.581.7GSM436364Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
1.479.9GSM436359Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
1.479.9GSM436373Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
1.479.9GSM436375Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.081e-562201611043_atCF214626--1e+0At4g11180disease resistance-responsive family protein / dirigent family proteinC.G.S.X.
0.143e-471881608133_atCA809505hypothetical protein LOC100244452-1e-33At5g59370ACT4 (ACTIN 4)C.G.S.X.
0.083e-291291608478_atCB969550hypothetical protein LOC100246825-2e-17At5g09810ACT7 (ACTIN 7)C.G.S.X.
0.013e-1361617739_atCB976948xyloglucan endotransglycosylase XET2-9e-31At5g13870EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4)C.G.S.X.
0.013e-1361612801_atBQ796403hypothetical protein LOC100254774-1e-13At5g06560unknown proteinC.G.S.X.
0.023e-1361606778_atCF607072hypothetical protein LOC100261953-6e-30At3g56740ubiquitin-associated (UBA)/TS-N domain-containing proteinC.G.S.X.
0.011e+0341620305_atAY043233.1--2e-4At1g65570polygalacturonase, putative / pectinase, putativeC.G.S.X.
0.011e+0341615923_atCA814782hypothetical protein LOC100259846-8e-8At4g25030unknown proteinC.G.S.X.
0.021e+0341614362_atCF212515--8e+0At5g44574unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6101082Arabidopsis thalianaAt5g09810830841ACT7 (ACTIN 7)Member of Actin gene family.Mutants are defective in germination and root growth.---C.G.S.X.
0.504e-161569Glycine maxGma.6406.1.S1_atCD394756--0At2g37620ACT1 (ACTIN 1)C.G.S.X.
0.520801Hordeum vulgareContig1391_atContig1391--0At5g09810ACT7 (ACTIN 7)C.G.S.X.
0.500896Oryza sativaOs11g0163100AK071450.1-Actin 7 (Actin 2)0At5g09810ACT7 (ACTIN 7)C.G.S.X.
0.5401233Populus trichocarpaPtpAffx.1258.4.S1_s_atCF232778actin 1 /// actin 9-0At5g09810ACT7 (ACTIN 7)C.G.S.X.
0.500938Triticum aestivumTa.28253.1.S1_atBJ250223--0At5g09810ACT7 (ACTIN 7)C.G.S.X.
0.530900Zea maysZm.16513.9.A1_a_atCD444572--0At5g09810ACT7 (ACTIN 7)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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