CoP: Co-expressed Biological Processes

Homology analysis

Gene ID Zm.8972.1.S1_at

Gene name hypothetical protein LOC100217237

Functional description Similar to At3g54320: WRI1 (WRINKLED 1) (Ev=7e-17)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.41	2e-101	369	Zm.15628.1.S1_at	CF628706	hypothetical protein LOC100193098	-	2e-10	At3g54320	WRI1 (WRINKLED 1)	O.I.	C.G.	S.X.
0.01	3e-2	40	Zm.8196.1.A1_at	BM336037	hypothetical protein LOC100193787	-	2e+0	At5g27780	auxin-responsive family protein	O.I.	C.G.	S.X.
0.01	3e-2	40	Zm.521.1.S1_at	AF200530.1	cellulose synthase6	-	1e-20	At2g21770	CESA9 (CELLULOSE SYNTHASE A9)	O.I.	C.G.	S.X.
0.02	3e-2	40	Zm.11848.1.A1_at	CF631118	calmodulin	-	3e-1	At1g73630	calcium-binding protein, putative	O.I.	C.G.	S.X.
0.01	1e-1	38	Zm.9163.1.A1_at	BM267003	-	-	8e-2	At4g33660	unknown protein	O.I.	C.G.	S.X.
0.01	1e-1	38	Zm.7166.1.A1_at	AF200532.1	cellulose synthase8	-	3e-36	At4g39350	CESA2 (CELLULOSE SYNTHASE A2)	O.I.	C.G.	S.X.
0.01	1e-1	38	Zm.522.1.S1_at	AF200531.1	cellulose synthase7	-	1e-38	At2g21770	CESA9 (CELLULOSE SYNTHASE A9)	O.I.	C.G.	S.X.
0.01	1e-1	38	Zm.433.1.A1_at	AF069908.1	pyruvate dehydrogenase2	-	1e-43	At5g50850	MAB1 (MACCI-BOU)	O.I.	C.G.	S.X.
0.01	1e-1	38	Zm.3558.1.A1_at	CA402352	-	-	3e+0	At1g68620	hydrolase	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.08	7e-17	89	At3g54320	Arabidopsis thaliana	824599	WRI1 (WRINKLED 1)	WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation.	-	-	-	O.I.	C.G.	S.X.
0.02	1e-3	46	GmaAffx.40840.2.S1_at	Glycine max	BG509258	-	-	4e-37	At2g47110	UBQ6	O.I.	C.G.	S.X.
0.06	2e-12	73	Contig18173_at	Hordeum vulgare	Contig18173	-	-	1e-1	At5g57390	AIL5 (AINTEGUMENTA-LIKE 5)	O.I.	C.G.	S.X.
0.25	2e-83	311	Os11g0129700	Oryza sativa	AK112088.1	-	Pathogenesis-related transcriptional factor andERF domain containing protein	1e-6	At3g54320	WRI1 (WRINKLED 1)	O.I.	C.G.	S.X.
0.07	4e-7	57	PtpAffx.207798.1.S1_at	Populus trichocarpa	pmrna15500	AP2 domain-containing transcription factor	-	4e-77	At5g17430	BBM (BABY BOOM)	O.I.	C.G.	S.X.
0.15	2e-45	184	TaAffx.65356.1.S1_at	Triticum aestivum	BJ249131	-	-	7e-5	At3g54320	WRI1 (WRINKLED 1)	O.I.	C.G.	S.X.
0.01	2e-2	40	1613936_x_at	Vitis vinifera	CF568996	-	-	8e-24	At5g38410	ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)	O.I.	C.G.	S.X.

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