Homology analysis

Gene ID Zm.6916.1.S1_at
Gene name hypothetical protein LOC100273981
Functional description Similar to At5g66750: CHR1 (CHROMATIN REMODELING 1) (Ev=9e-13)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.353e-106385Zm.10239.1.S1_atAF461813.1chromatin complex subunit A101-5e-25At5g66750CHR1 (CHROMATIN REMODELING 1)O.I.C.G.S.X.
0.141e-1687Zm.15907.1.A1_atAI691196--3e-1At5g56540AGP14 (ARABINOGALACTAN PROTEIN 14)O.I.C.G.S.X.
0.019e-238Zm.13690.1.A1_atAY106813.1--2e-14At5g19310homeotic gene regulator, putativeO.I.C.G.S.X.
0.011e+034Zm.6370.1.A1_atBG266097--2e+0At3g47300SELT (SELT-LIKE PROTEIN PRECURSOR)O.I.C.G.S.X.
0.011e+034Zm.6312.1.A1_atCF043412--1e+0At3g20557unknown proteinO.I.C.G.S.X.
0.011e+034Zm.3782.1.S1_atAW066955vacuolar protein sorting 26-1e-48At4g27690VPS26B (VACUOLAR PROTEIN SORTING 26B)O.I.C.G.S.X.
0.011e+034Zm.11689.1.S1_atBM379946hypothetical protein LOC100279725-3e+0At4g34590GBF6 (G-BOX BINDING FACTOR 6)O.I.C.G.S.X.
0.026e+032ZmAffx.398.1.S1_atAI676826--3e+0At4g15150glycine-rich proteinO.I.C.G.S.X.
0.026e+032ZmAffx.398.1.A1_atAI676826--3e+0At4g15150glycine-rich proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.109e-1375At5g66750Arabidopsis thaliana836808CHR1 (CHROMATIN REMODELING 1)Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation.---O.I.C.G.S.X.
0.052e-1171GmaAffx.45461.1.S1_atGlycine maxBE659709--2e-27At5g66750CHR1 (CHROMATIN REMODELING 1)O.I.C.G.S.X.
0.494e-112404Contig8894_atHordeum vulgareContig8894--3e-6At5g66750CHR1 (CHROMATIN REMODELING 1)O.I.C.G.S.X.
0.071e-28129Os03g0722700Oryza sativaAK060978.1-Hypothetical protein3e+0At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)O.I.C.G.S.X.
0.122e-24115PtpAffx.212466.1.S1_atPopulus trichocarpapmrna24426chromatin remodeling complex subunit-2e-32At5g66750CHR1 (CHROMATIN REMODELING 1)O.I.C.G.S.X.
0.488e-106385Ta.23819.2.S1_x_atTriticum aestivumCK208180--4e-6At5g66750CHR1 (CHROMATIN REMODELING 1)O.I.C.G.S.X.
0.011e+0341616916_a_atVitis viniferaCB346827hypothetical protein LOC100251636-7e-27At5g0245060S ribosomal protein L36 (RPL36C)O.I.C.G.S.X.



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