CoP: Co-expressed Biological Processes

Homology analysis

Gene ID Zm.6454.1.A1_at

Gene name PP1/PP2A phosphatases pleiotropic regulator PRL1

Functional description Similar to At4g15900: PRL1 (PLEIOTROPIC REGULATORY LOCUS 1) (Ev=9e-29)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.01	5e-7	56	Zm.6870.1.A1_at	BM379176	dihydroflavonol-4-reductase	-	2e-11	At4g16430	basic helix-loop-helix (bHLH) family protein	O.I.	C.G.	S.X.
0.01	5e-7	56	Zm.11831.1.S1_a_at	CA401860	glucan endo-1,3-beta-glucosidase 6	-	7e-5	At5g58090	glycosyl hydrolase family 17 protein	O.I.	C.G.	S.X.
0.01	2e-6	54	Zm.1725.1.S1_at	AW355926	-	-	2e-1	At1g30910	molybdenum cofactor sulfurase family protein	O.I.	C.G.	S.X.
0.01	8e-6	52	Zm.8426.1.A1_at	BM347536	hypothetical protein LOC100216659	-	8e-1	At1g71691	GDSL-motif lipase/hydrolase family protein	O.I.	C.G.	S.X.
0.01	8e-6	52	Zm.19067.1.S1_at	AY107493.1	hypothetical protein LOC100279588	-	3e+0	At5g20810	auxin-responsive protein, putative / small auxin up RNA (SAUR_B)	O.I.	C.G.	S.X.
0.02	8e-6	52	Zm.17544.1.A1_at	CF004915	thylakoid membrane phosphoprotein 14 kda	-	3e-2	At2g46820	PSI-P (PHOTOSYSTEM I P SUBUNIT)	O.I.	C.G.	S.X.
0.02	8e-6	52	Zm.14820.1.S1_at	AY106101.1	-	-	5e+0	At5g14602	unknown protein	O.I.	C.G.	S.X.
0.01	8e-6	52	Zm.14710.1.S1_at	AY232823.1	nucleosome/chromatin assembly factor group A	-	1e-5	At4g26110	NAP1	O.I.	C.G.	S.X.
0.02	8e-6	52	Zm.14265.1.A1_at	AY105423.1	hypothetical protein LOC100272919	-	5e-53	At1g04480	60S ribosomal protein L23 (RPL23A)	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.35	9e-29	129	At4g15900	Arabidopsis thaliana	827272	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear WD40 protein that is imported into the nucleus. Essential for plant innate immunity. Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10.	-	-	-	O.I.	C.G.	S.X.
0.26	9e-36	153	GmaAffx.90608.1.S1_at	Glycine max	CF806333	-	-	5e-102	At4g15900	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	O.I.	C.G.	S.X.
0.24	2e-80	299	Contig17157_at	Hordeum vulgare	Contig17157	-	-	2e-14	At4g15900	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	O.I.	C.G.	S.X.
0.51	0	991	Os03g0339100	Oryza sativa	AK111641.1	-	PP1/PP2A phosphatases pleiotropic regulator PRL2	2e-17	At4g15900	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	O.I.	C.G.	S.X.
0.30	6e-34	147	Ptp.6543.1.S1_s_at	Populus trichocarpa	CV233854	hypothetical protein	-	2e-121	At4g15900	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	O.I.	C.G.	S.X.
0.51	4e-167	589	Ta.6105.1.S1_at	Triticum aestivum	CK192946	-	-	3e-22	At4g15900	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	O.I.	C.G.	S.X.
0.01	8e-2	38	1621679_at	Vitis vinifera	CB003331	similar to Os11g0657300	-	4e-22	At2g14285	-	O.I.	C.G.	S.X.

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