Homology analysis

Gene ID Zm.6451.2.S1_a_at
Gene name
Functional description Similar to At1g59750: ARF1 (AUXIN RESPONSE FACTOR 1) (Ev=2e-4)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
1.000801Zm.6451.2.A1_atAI770434--1e-2At5g43700ATAUX2-11 (AUXIN INDUCIBLE 2-11)O.I.C.G.S.X.
0.255e-102369Zm.6451.1.S1_atAY107195.1--2e-11At1g59750ARF1 (AUXIN RESPONSE FACTOR 1)O.I.C.G.S.X.
0.099e-1165Zm.16212.1.A1_atCA400755--8e-2At4g23980ARF9 (AUXIN RESPONSE FACTOR 9)O.I.C.G.S.X.
0.099e-1165Zm.16212.1.A1_s_atCA400755auxin response factor 1-8e-2At4g23980ARF9 (AUXIN RESPONSE FACTOR 9)O.I.C.G.S.X.
0.066e-959Zm.4043.1.S1_atAW091252--3e-10At1g59750ARF1 (AUXIN RESPONSE FACTOR 1)O.I.C.G.S.X.
0.061e-652Zm.4086.1.A1_atAI834525--9e-1At1g59750ARF1 (AUXIN RESPONSE FACTOR 1)O.I.C.G.S.X.
0.035e-340Zm.19101.1.S1_atCF624534hypothetical protein LOC100273242-5e-8At4g28640IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11)O.I.C.G.S.X.
0.013e-134Zm.342.2.A1_atU65948.1hypothetical protein LOC100193930 /// starch branching enzyme3-2e-82At5g03650SBE2.2 (starch branching enzyme 2.2)O.I.C.G.S.X.
0.031e+032Zm.9882.1.A1_atAY109038.1keratinocytes-associated protein 2-4e-1At1g77350unknown proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.062e-446At1g59750Arabidopsis thaliana842268ARF1 (AUXIN RESPONSE FACTOR 1)Encodes a member of the auxin response factor family. ARFs bind to the cis element 5'-TGTCTC-3' ARFs mediate changes in gene expression in response to auxin. ARF's form heterodimers with IAA/AUX genes. ARF1 enhances mutant phenotypes of ARF2 and may act with ARF2 to control aspects of maturation and senescence.ARF1:LUC and 3xHA:ARF1 proteins have a half-life of ~3-4 hours and their degradation is reduced by proteasome inhibitors. 3xHA:ARF1 degradation is not affected by a pre-treatment with IAA. A nuclear-targeted fusion protein containing the middle region of ARF1 linked to LUC:NLS has a similar half-life to the full-length ARF1:LUC construct. The degradation of 3xHA:ARF1 is not affected in an axr6-3 mutant grown at room temperature, although the degradation of AXR2/IAA7 is slowed under these conditions.---O.I.C.G.S.X.
0.071e-963Gma.6662.1.S1_atGlycine maxBI968600--2e-11At4g23980ARF9 (AUXIN RESPONSE FACTOR 9)O.I.C.G.S.X.
0.162e-1581Contig10952_atHordeum vulgareContig10952--2e-10At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)O.I.C.G.S.X.
0.081e-1687Os04g0442000Oryza sativaAK064925.1-Auxin response factor 2 (ARF1-binding protein)(ARF1-BP)8e-21At1g59750ARF1 (AUXIN RESPONSE FACTOR 1)O.I.C.G.S.X.
0.073e-756PtpAffx.7169.1.A1_atPopulus trichocarpaCV237696hypothetical protein-9e-5At2g46530ARF11 (AUXIN RESPONSE FACTOR 11)O.I.C.G.S.X.
0.158e-35147TaAffx.113091.1.S1_atTriticum aestivumCA618168--4e+0At2g20740-O.I.C.G.S.X.
0.142e-8571619716_atVitis viniferaCF519146hypothetical protein LOC100263592-1e-21At1g59750ARF1 (AUXIN RESPONSE FACTOR 1)O.I.C.G.S.X.



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