CoP: Co-expressed Biological Processes

Homology analysis

Gene ID Zm.6443.1.A1_at

Gene name hypothetical protein AY107910

Functional description Similar to At2g02560: CAND1 (CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED) (Ev=4e-25)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.01	1e-1	38	Zm.4849.1.S1_at	AI712259	hypothetical protein LOC100216858	-	3e-3	At1g04750	VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)	O.I.	C.G.	S.X.
0.01	6e-1	36	Zm.5774.1.S1_at	CK370317	hypothetical protein LOC100280323	-	7e-5	At1g49050	aspartyl protease family protein	O.I.	C.G.	S.X.
0.01	2e+0	34	Zm.9828.1.A1_at	BM340313	zinc finger protein 7	-	3e-1	At2g20260	PSAE-2 (photosystem I subunit E-2)	O.I.	C.G.	S.X.
0.01	2e+0	34	Zm.5203.1.A1_at	AI612407	-	-	9e+0	At5g50510	-	O.I.	C.G.	S.X.
0.01	2e+0	34	Zm.4768.1.A1_at	AY107116.1	hypothetical protein LOC100192636	-	5e-30	At1g64550	ATGCN3	O.I.	C.G.	S.X.
0.01	2e+0	34	Zm.18236.1.S1_at	CN844983	DNL zinc finger family protein	-	2e+0	At1g08830	CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1)	O.I.	C.G.	S.X.
0.01	2e+0	34	Zm.1174.2.S1_at	BE511804	-	-	5e-5	At1g64630	WNK10 (WITH NO LYSINE KINASE 10)	O.I.	C.G.	S.X.
0.01	9e+0	32	Zm.9620.1.A1_at	CA403653	alginate regulatory protein AlgP	-	2e+0	At1g11850	unknown protein	O.I.	C.G.	S.X.
0.01	9e+0	32	Zm.961.1.A1_at	CA400684	LAP4 protein	-	2e+0	At2g02370	-	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.18	4e-25	117	At2g02560	Arabidopsis thaliana	814786	CAND1 (CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED)	Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1.	-	-	-	O.I.	C.G.	S.X.
0.23	4e-20	101	Gma.7683.1.S1_at	Glycine max	BI968408	-	-	3e-28	At2g02560	CAND1 (CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED)	O.I.	C.G.	S.X.
0.67	0	1326	Contig4922_s_at	Hordeum vulgare	Contig4922	-	-	6e-24	At2g02560	CAND1 (CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED)	O.I.	C.G.	S.X.
0.52	0	1431	Os02g0167700	Oryza sativa	AK069128.1	-	TBP-interacting 120 family protein	6e-38	At2g02560	CAND1 (CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED)	O.I.	C.G.	S.X.
0.13	1e-19	99	PtpAffx.7326.1.S1_s_at	Populus trichocarpa	CK090735	hypothetical protein	-	2e-32	At2g02560	CAND1 (CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED)	O.I.	C.G.	S.X.
0.65	0	1429	Ta.892.1.S1_a_at	Triticum aestivum	CD939459	-	-	3e-29	At2g02560	CAND1 (CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED)	O.I.	C.G.	S.X.
0.03	4e-7	56	1617559_at	Vitis vinifera	CA810324	hypothetical protein LOC100252408	-	6e-6	At2g02560	CAND1 (CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED)	O.I.	C.G.	S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage