CoP: Co-expressed Biological Processes

Homology analysis

Gene ID Zm.4876.1.S1_at

Gene name

Functional description Similar to At3g22200: POP2 (POLLEN-PISTIL INCOMPATIBILITY 2) (Ev=9e-26)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.20	2e-151	535	Zm.4876.2.A1_at	BM337336	-	-	4e-1	At3g02790	zinc finger (C2H2 type) family protein	O.I.	C.G.	S.X.
0.32	3e-138	492	Zm.12919.1.A1_at	BG320956	aminotransferase y4uB	-	1e-1	At3g22200	POP2 (POLLEN-PISTIL INCOMPATIBILITY 2)	O.I.	C.G.	S.X.
0.17	4e-103	375	Zm.16762.1.A1_s_at	BM335792	-	-	3e-1	At3g02790	zinc finger (C2H2 type) family protein	O.I.	C.G.	S.X.
0.01	3e-2	40	Zm.3400.1.S1_at	CN845120	-	-	2e-9	At5g17170	ENH1 (enhancer of sos3-1)	O.I.	C.G.	S.X.
0.01	2e+0	34	Zm.6698.1.A1_at	AY104868.1	periodic tryptophan protein 1	-	5e+0	At5g13890	unknown protein	O.I.	C.G.	S.X.
0.01	2e+0	34	Zm.6698.1.S1_at	AY104868.1	-	-	5e+0	At5g13890	unknown protein	O.I.	C.G.	S.X.
0.01	2e+0	34	Zm.6460.1.A1_at	BM079919	hypothetical protein LOC100216569	-	5e-3	At2g39130	amino acid transporter family protein	O.I.	C.G.	S.X.
0.01	2e+0	34	Zm.5560.1.S1_at	AY106940.1	hypothetical protein LOC100279306	-	4e+0	At5g03120	unknown protein	O.I.	C.G.	S.X.
0.01	2e+0	34	Zm.17532.1.A1_at	CK369868	hypothetical protein LOC100279205	-	2e-1	At5g53970	aminotransferase, putative	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.17	9e-26	119	At3g22200	Arabidopsis thaliana	821784	POP2 (POLLEN-PISTIL INCOMPATIBILITY 2)	Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.	-	-	-	O.I.	C.G.	S.X.
0.13	8e-27	123	Gma.7492.1.S1_at	Glycine max	AW597705	-	-	1e-45	At3g22200	POP2 (POLLEN-PISTIL INCOMPATIBILITY 2)	O.I.	C.G.	S.X.
0.49	0	1001	Contig4230_at	Hordeum vulgare	Contig4230	-	-	1e-34	At3g22200	POP2 (POLLEN-PISTIL INCOMPATIBILITY 2)	O.I.	C.G.	S.X.
0.54	0	960	Os04g0614600	Oryza sativa	AF297651.1	-	Viroid RNA-binding protein (Fragment)	4e-31	At3g22200	POP2 (POLLEN-PISTIL INCOMPATIBILITY 2)	O.I.	C.G.	S.X.
0.30	4e-44	180	Ptp.2932.1.S1_at	Populus trichocarpa	BP932968	hypothetical protein	-	5e-58	At3g22200	POP2 (POLLEN-PISTIL INCOMPATIBILITY 2)	O.I.	C.G.	S.X.
0.50	0	856	Ta.951.3.S1_x_at	Triticum aestivum	BE585584	-	-	3e-25	At3g22200	POP2 (POLLEN-PISTIL INCOMPATIBILITY 2)	O.I.	C.G.	S.X.
0.02	2e-5	50	1613627_at	Vitis vinifera	BQ798933	hypothetical protein LOC100248495	-	2e-27	At3g22200	POP2 (POLLEN-PISTIL INCOMPATIBILITY 2)	O.I.	C.G.	S.X.

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