Homology analysis

Gene ID Zm.481.1.S1_at
Gene name mismatch binding protein Mus3
Functional description Similar to At4g02070: MSH6 (MUTS HOMOLOG 6) (Ev=2e-8)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.6703077Zm.481.1.A1_atAF227632.1mismatch binding protein Mus3-2e-8At4g02070MSH6 (MUTS HOMOLOG 6)O.I.C.G.S.X.
0.012e-344Zm.216.1.S1_atAJ238787.1MutS homolog2-2e-18At3g24495MSH7 (MUTS HOMOLOG 7)O.I.C.G.S.X.
0.011e-138ZmAffx.20.1.A1_atAI600385--3e+0At4g02550unknown proteinO.I.C.G.S.X.
0.011e-138ZmAffx.20.1.S1_atAI600385--3e+0At4g02550unknown proteinO.I.C.G.S.X.
0.015e-136Zm.7103.1.S1_atBM335919--6e-57At4g2482026S proteasome regulatory subunit, putative (RPN7)O.I.C.G.S.X.
0.015e-136Zm.16813.1.S1_atAI649555--2e+0At5g24870zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.012e+034Zm.832.1.A1_atAY107728.1hypothetical protein LOC100275137-1e+0At1g54140TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT)O.I.C.G.S.X.
0.012e+034Zm.832.1.S1_atAY107728.1--1e+0At1g54140TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT)O.I.C.G.S.X.
0.012e+034Zm.3715.2.A1_a_atAY103872.1hypothetical protein LOC100273717 /// spliceosome RNA helicase BAT1-9e-152At5g11170ATP binding / ATP-dependent helicase/ helicase/ nucleic acid bindingO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.042e-861At4g02070Arabidopsis thaliana828147MSH6 (MUTS HOMOLOG 6)encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex.---O.I.C.G.S.X.
0.014e-138HgAffx.19914.1.S1_atGlycine maxCK349758--2e-2At5g28640AN3 (ANGUSTIFOLIA 3)O.I.C.G.S.X.
0.156e-41169Contig22271_atHordeum vulgareContig22271--9e+0At3g55470C2 domain-containing proteinO.I.C.G.S.X.
0.470852Os09g0407600Oryza sativa9637.m02072-DNA mismatch repair protein MutS, C-terminaldomain containing protein4e-17At4g02070MSH6 (MUTS HOMOLOG 6)O.I.C.G.S.X.
0.102e-1275PtpAffx.211727.1.S1_atPopulus trichocarpapmrna22979hypothetical protein-9e-49At4g02070MSH6 (MUTS HOMOLOG 6)O.I.C.G.S.X.
0.161e-77291Ta.24096.1.S1_atTriticum aestivumAJ131670.2MSH6 protein-3e-2At3g43700ATBPM6 (BTB-POZ and MATH domain 6)O.I.C.G.S.X.
0.013e-1361612997_a_atVitis viniferaCA814228hypothetical protein LOC100242640-1e-4At3g26510octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinO.I.C.G.S.X.



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