Homology analysis

Gene ID Zm.4355.1.A1_at
Gene name seed maturation protein
Functional description Similar to At5g10140: FLC (FLOWERING LOCUS C) (Ev=2e+0)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.011e+034Zm.9562.1.S1_atD88452.1aldehyde oxidase-2-4e-5At5g20960AAO1 (ARABIDOPSIS ALDEHYDE OXIDASE 1)O.I.C.G.S.X.
0.011e+034Zm.290.1.S1_atBM079195Rho-related protein from plants 5-9e-37At3g48040ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)O.I.C.G.S.X.
0.011e+034Zm.13811.1.A1_atAY104705.1--2e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)O.I.C.G.S.X.
0.014e+032Zm.9903.1.A1_atBM335103hypothetical protein LOC100273348-3e+0At1g63220C2 domain-containing proteinO.I.C.G.S.X.
0.014e+032Zm.5699.1.A1_atBM333318ras-related protein Rab7 /// ras-related protein Rab7-2e-44At3g18820ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F)O.I.C.G.S.X.
0.014e+032Zm.3665.1.S1_atD88451.1aldehyde oxidase-4e-2At3g43600AAO2 (ALDEHYDE OXIDASE 2)O.I.C.G.S.X.
0.014e+032Zm.3256.1.A1_atCK347684hypothetical protein LOC100277067-3e-6At5g48020unknown proteinO.I.C.G.S.X.
0.014e+032Zm.3256.1.A1_a_atCK347684hypothetical protein LOC100277067-3e-6At5g48020unknown proteinO.I.C.G.S.X.
0.024e+032Zm.16310.1.S1_atAJ006548hypothetical protein LOC100276764-2e+0At3g19274unknown proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.022e+034At5g10140Arabidopsis thaliana830878FLC (FLOWERING LOCUS C)MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Both maternal and paternal alleles are reset by vernalization, but their earliest activation differs in timing and location. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Expression is also repressed by two small RNAs (30- and 24-nt) complementary to the FLC sense strand 3 to the polyA site. The small RNAs are most likely derived from an antisense transcript of FLC. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex.---O.I.C.G.S.X.
0.155e-240GmaAffx.93319.1.S1_atGlycine maxCF809044--2e-2At3g10915reticulon family proteinO.I.C.G.S.X.
0.021e+034Contig20672_x_atHordeum vulgareContig20672--5e+0At5g54430universal stress protein (USP) family proteinO.I.C.G.S.X.
0.451e-160567Os.48943.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.043e+034PtpAffx.137381.1.S1_atPopulus trichocarpaAJ774366hypothetical protein-5e-4At3g10915reticulon family proteinO.I.C.G.S.X.
0.141e-1171Ta.4214.1.A1_atTriticum aestivumBJ252415--2e-2At4g37920unknown proteinO.I.C.G.S.X.
0.023e+0321610860_atVitis viniferaCB972633--2e+0At3g49550unknown proteinO.I.C.G.S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage