Homology analysis

Gene ID Zm.18133.1.A1_at
Gene name
Functional description Similar to At1g78570: RHM1 (RHAMNOSE BIOSYNTHESIS 1) (Ev=8e-38)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
1.0003079Zm.18133.1.S1_atAY103981.1--8e-38At1g78570RHM1 (RHAMNOSE BIOSYNTHESIS 1)O.I.C.G.S.X.
0.6401291Zm.13153.1.A1_atBI993275RHM1-2e-32At1g78570RHM1 (RHAMNOSE BIOSYNTHESIS 1)O.I.C.G.S.X.
0.491e-37157Zm.13518.1.A1_atCO522595hypothetical protein LOC100191391-3e-43At1g78570RHM1 (RHAMNOSE BIOSYNTHESIS 1)O.I.C.G.S.X.
0.032e-240Zm.9208.1.S1_atAY104924.1dTDP-4-dehydrorhamnose reductase-4e-11At1g63000NRS/ER (NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE)O.I.C.G.S.X.
0.013e-136Zm.4225.1.S1_atAW225317hypothetical protein LOC100192639-3e-6At1g04960-O.I.C.G.S.X.
0.011e+034Zm.9712.1.A1_atBM336467--9e-2At5g25810tny (TINY)O.I.C.G.S.X.
0.011e+034Zm.2768.1.A1_atAW067159Hypothetical protein LOC100193535-1e+0At5g04760myb family transcription factorO.I.C.G.S.X.
0.011e+034Zm.2311.1.A1_atAY187718.1SET domain protein SDG111-3e-4At1g73100SUVH3 (SU(VAR)3-9 HOMOLOG 3)O.I.C.G.S.X.
0.011e+034Zm.10335.1.A1_atCF016467dnaJ subfamily C member 8-2e-4At5g22080DNAJ heat shock N-terminal domain-containing proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.368e-38159At1g78570Arabidopsis thaliana844193RHM1 (RHAMNOSE BIOSYNTHESIS 1)Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli.---O.I.C.G.S.X.
0.399e-54212Gma.7572.1.S1_atGlycine maxBI970498--5e-77At1g78570RHM1 (RHAMNOSE BIOSYNTHESIS 1)O.I.C.G.S.X.
0.520737Contig4348_atHordeum vulgareContig4348--1e-84At1g78570RHM1 (RHAMNOSE BIOSYNTHESIS 1)O.I.C.G.S.X.
0.540827Os03g0278200Oryza sativaAK103544.1-NAD-dependent epimerase/dehydratase family protein6e-83At1g78570RHM1 (RHAMNOSE BIOSYNTHESIS 1)O.I.C.G.S.X.
0.333e-32141PtpAffx.5688.1.S1_atPopulus trichocarpaCV238865hypothetical protein-9e-72At1g78570RHM1 (RHAMNOSE BIOSYNTHESIS 1)O.I.C.G.S.X.
0.550773Ta.28218.1.S1_a_atTriticum aestivumCK157558--2e-58At1g78570RHM1 (RHAMNOSE BIOSYNTHESIS 1)O.I.C.G.S.X.
0.385e-522041614216_atVitis viniferaCF512284hypothetical protein LOC100260586-2e-72At1g53500MUM4 (MUCILAGE-MODIFIED 4)O.I.C.G.S.X.



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