Homology analysis

Gene ID Zm.16475.2.S1_at
Gene name
Functional description Similar to At2g30260: U2B'' (U2 small nuclear ribonucleoprotein B) (Ev=2e-7)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.201e-142506Zm.16475.3.A1_a_atBQ704114spliceosomal protein-2e-7At2g30260U2B'' (U2 small nuclear ribonucleoprotein B)O.I.C.G.S.X.
0.201e-142506Zm.16475.3.A1_x_atBQ704114--2e-7At2g30260U2B'' (U2 small nuclear ribonucleoprotein B)O.I.C.G.S.X.
0.201e-142506Zm.16475.3.A1_atBQ704114--2e-7At2g30260U2B'' (U2 small nuclear ribonucleoprotein B)O.I.C.G.S.X.
0.181e-142506Zm.16475.3.S1_atCF019135--2e-7At2g30260U2B'' (U2 small nuclear ribonucleoprotein B)O.I.C.G.S.X.
0.336e-135480Zm.16475.4.S1_atBG841751--1e-3At1g06960small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putativeO.I.C.G.S.X.
0.092e-2099Zm.10603.1.A1_atCF627590hypothetical protein LOC100193042-4e-2At3g32930unknown proteinO.I.C.G.S.X.
0.103e-1995Zm.3301.1.S1_atBG842863hypothetical protein LOC100216845-7e-25At5g26030FC1 (ferrochelatase 1)O.I.C.G.S.X.
0.063e-1375Zm.8646.1.A1_atBM349186--7e-2At4g39680SAP domain-containing proteinO.I.C.G.S.X.
0.047e-857Zm.6750.1.S1_atBM333179hypothetical protein LOC100217007-2e-4At4g11410short-chain dehydrogenase/reductase (SDR) family proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.172e-757At2g30260Arabidopsis thaliana817576U2B'' (U2 small nuclear ribonucleoprotein B)encodes U2B", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus.---O.I.C.G.S.X.
0.153e-1997GmaAffx.58650.1.S1_atGlycine maxBE021790--3e-28At1g06960small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putativeO.I.C.G.S.X.
0.525e-154543Contig7570_atHordeum vulgareContig7570--1e-7At1g06960small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putativeO.I.C.G.S.X.
0.475e-151535Os.12051.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.093e-1687PtpAffx.9494.1.S1_atPopulus trichocarpaDN491329hypothetical protein-1e-26At2g30260U2B'' (U2 small nuclear ribonucleoprotein B)O.I.C.G.S.X.
0.483e-160565Ta.9408.1.S1_atTriticum aestivumBJ309615--2e-4At1g06960small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putativeO.I.C.G.S.X.
0.113e-9611621155_atVitis viniferaBQ794745hypothetical protein LOC100248478-8e-34At2g30260U2B'' (U2 small nuclear ribonucleoprotein B)O.I.C.G.S.X.



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