Homology analysis

Gene ID Zm.1390.1.A1_at
Gene name
Functional description Similar to At3g21230: 4CL5 (4-coumarate:CoA ligase 5) (Ev=3e-3)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.460726Zm.3406.1.S1_atAY566301.14-coumarate coenzyme A ligase-7e-2At1g516804CL1 (4-COUMARATE:COA LIGASE 1)O.I.C.G.S.X.
0.081e-344Zm.11845.1.A1_atCO532590--3e-1At1g650604CL3O.I.C.G.S.X.
0.012e-240Zm.12355.1.S1_atCO520111hypothetical protein LOC100280053-2e-4At1g77390CYCA1O.I.C.G.S.X.
0.012e-240Zm.1074.1.A1_atCF631708--1e+0At1g62940ACOS5 (ACYL-COA SYNTHETASE 5)O.I.C.G.S.X.
0.047e-238Zm.18403.1.A1_atBM072852hypothetical protein LOC100274307-5e-3At5g381204-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinO.I.C.G.S.X.
0.013e-136Zm.5679.1.S1_atCD437138hypothetical protein LOC100216885-3e-3At2g43950OEP37O.I.C.G.S.X.
0.021e+034Zm.7293.1.S1_atBI675120--6e+0At3g10920MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1)O.I.C.G.S.X.
0.011e+034Zm.3489.1.A1_atAW433407--2e+0At5g29613unknown proteinO.I.C.G.S.X.
0.021e+034Zm.11770.1.A1_atBM380607hypothetical protein LOC100191551-9e-5At5g12010unknown proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.083e-344At3g21230Arabidopsis thaliana8216774CL5 (4-coumarate:CoA ligase 5)The gene encodes a 4-coumarate coenzyme A ligase being able to use sinapate as substrate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, 5-OH-ferulic acid, ferulic acid and sinapic acid. At4CL5 was unable to use cinnamic acid as substrate. Knockout of At4CL5 (4cl5) revealed no effect on syringyl lignin content indicating that the activity observed does probably not occur in vivo.---O.I.C.G.S.X.
0.122e-1791Gma.4928.1.S1_a_atGlycine maxAF002259.14-coumarate:CoA ligase isoenzyme 2-4e-9At1g516804CL1 (4-COUMARATE:COA LIGASE 1)O.I.C.G.S.X.
0.590926Contig4674_atHordeum vulgareContig4674--5e-2At1g516804CL1 (4-COUMARATE:COA LIGASE 1)O.I.C.G.S.X.
0.520922Os06g0656500Oryza sativaAK068985.1--2e-2At3g212404CL2 (4-COUMARATE:COA LIGASE 2)O.I.C.G.S.X.
0.126e-859PtpAffx.12056.3.S1_a_atPopulus trichocarpaCV2594944-Coumarate:CoA ligase-5e-22At1g650604CL3O.I.C.G.S.X.
0.542e-170599TaAffx.30205.2.S1_s_atTriticum aestivumCA627137--1e-4At3g212404CL2 (4-COUMARATE:COA LIGASE 2)O.I.C.G.S.X.
0.227e-321371609307_atVitis viniferaCD715818hypothetical protein LOC100254698-3e-16At3g212404CL2 (4-COUMARATE:COA LIGASE 2)O.I.C.G.S.X.



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