Homology analysis

Gene ID TaAffx.8533.2.S1_at
Gene name
Functional description Similar to At3g21230: 4CL5 (4-coumarate:CoA ligase 5) (Ev=4e-3)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.562e-131468TaAffx.8533.1.S1_s_atCA623870--5e-6At3g212404CL2 (4-COUMARATE:COA LIGASE 2)O.I.C.G.S.X.
0.366e-67254TaAffx.30205.2.S1_s_atCA627137--1e-4At3g212404CL2 (4-COUMARATE:COA LIGASE 2)O.I.C.G.S.X.
0.284e-49194Ta.5623.1.S1_x_atCK197632--2e+0At3g212404CL2 (4-COUMARATE:COA LIGASE 2)O.I.C.G.S.X.
0.167e-1167TaAffx.128713.1.S1_atCK215460--1e-8At3g212404CL2 (4-COUMARATE:COA LIGASE 2)O.I.C.G.S.X.
0.061e-654Ta.3609.1.S1_a_atCA501559--3e-7At1g62940ACOS5 (ACYL-COA SYNTHETASE 5)O.I.C.G.S.X.
0.114e-652Ta.29966.1.S1_atCA683806--6e-1At5g11500unknown proteinO.I.C.G.S.X.
0.242e-550TaAffx.108196.1.S1_atCA690860--1e+1At5g47520AtRABA5a (Arabidopsis Rab GTPase homolog A5a)O.I.C.G.S.X.
0.142e-240Ta.3609.3.S1_a_atBJ208086--5e-6At1g62940ACOS5 (ACYL-COA SYNTHETASE 5)O.I.C.G.S.X.
0.011e+034Ta.13336.1.S1_atCK212277apetala2 protein-3e-16At5g67180AP2 domain-containing transcription factor, putativeO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.054e-342At3g21230Arabidopsis thaliana8216774CL5 (4-coumarate:CoA ligase 5)The gene encodes a 4-coumarate coenzyme A ligase being able to use sinapate as substrate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, 5-OH-ferulic acid, ferulic acid and sinapic acid. At4CL5 was unable to use cinnamic acid as substrate. Knockout of At4CL5 (4cl5) revealed no effect on syringyl lignin content indicating that the activity observed does probably not occur in vivo.---O.I.C.G.S.X.
0.103e-1479Gma.4928.1.S1_a_atGlycine maxAF002259.14-coumarate:CoA ligase isoenzyme 2-4e-9At1g516804CL1 (4-COUMARATE:COA LIGASE 1)O.I.C.G.S.X.
0.282e-65248Contig4674_atHordeum vulgareContig4674--5e-2At1g516804CL1 (4-COUMARATE:COA LIGASE 1)O.I.C.G.S.X.
0.232e-74280Os06g0656500Oryza sativaAK068985.1--2e-2At3g212404CL2 (4-COUMARATE:COA LIGASE 2)O.I.C.G.S.X.
0.075e-342PtpAffx.12056.3.S1_a_atPopulus trichocarpaCV2594944-Coumarate:CoA ligase-5e-22At1g650604CL3O.I.C.G.S.X.
0.149e-20951609307_atVitis viniferaCD715818hypothetical protein LOC100254698-3e-16At3g212404CL2 (4-COUMARATE:COA LIGASE 2)O.I.C.G.S.X.
0.460636Zm.1390.1.A1_atZea maysAY106966.1--3e-3At3g212304CL5 (4-coumarate:CoA ligase 5)O.I.C.G.S.X.



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