Homology analysis

Gene ID TaAffx.31585.1.S1_at
Gene name
Functional description Similar to At5g64813: LIP1 (Light Insensitive Period1) (Ev=1e-1)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.384e-48190Ta.13914.1.S1_x_atBQ743800--3e-1At5g64813LIP1 (Light Insensitive Period1)O.I.C.G.S.X.
0.384e-48190Ta.13914.1.S1_s_atBQ743800--3e-1At5g64813LIP1 (Light Insensitive Period1)O.I.C.G.S.X.
0.342e-34145TaAffx.56723.1.A1_x_atCA645697--5e+0At4g20470unknown proteinO.I.C.G.S.X.
0.054e-238TaAffx.65157.1.S1_atBJ258800--9e-1At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.C.G.S.X.
0.021e-136Ta.22565.1.S1_atBT009372.1--3e-7At3g55710UDP-glucoronosyl/UDP-glucosyl transferase family proteinO.I.C.G.S.X.
0.021e-136Ta.22565.1.S1_x_atBT009372.1--3e-7At3g55710UDP-glucoronosyl/UDP-glucosyl transferase family proteinO.I.C.G.S.X.
0.032e+032TaAffx.120885.1.S1_s_atCA694004S-adenosylmethionine decarboxylase precursor-3e-11At3g02468CPuORF9 (Conserved peptide upstream open reading frame 9)O.I.C.G.S.X.
0.032e+032Ta.5945.1.S1_atCD920884--6e+0At2g27730unknown proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.031e-136At5g64813Arabidopsis thaliana836603LIP1 (Light Insensitive Period1)The LIP1 gene encodes a small GTPase that influences the light input pathway of the plant circadian network. An MBP:LIP1 fusion protein has GTP hydrolyzing abilities in vitro. In plants, LIP1 seems to play a negative role in regulating circadian period that can be suppressed by light. LIP1 also seems to negatively affect light-pulse-dependent resetting of the clock, especially during the first portion of the subjective evening. LIP1 expression levels are not significantly affected by the circadian clock in seedlings grown under LL conditions. The levels of the YFP:LIP1 protein expressed under the control of the 35S promoter, shows a low amplitude variation, with protein levels peaking near the beginning of subjective night under LL conditions. In hypocotyl epidermal cells of dark and light-grown seedlings, a YFP:LIP1 fusion protein can be seen in the cytoplasm and the nucleus, and does not cluster in nuclear speckles. LIP1 may also be involved in photomorphogenesis.---O.I.C.G.S.X.
0.058e-134GmaAffx.42464.1.S1_atGlycine maxBM893519--5e-2At4g17710HDG4 (HOMEODOMAIN GLABROUS 4)O.I.C.G.S.X.
0.402e-36151Contig15524_atHordeum vulgareContig15524--3e-1At1g57730zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.043e-136OsAffx.23844.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.058e-134PtpAffx.5268.1.A1_atPopulus trichocarpaCV255253--3e-3At4g03165unknown proteinO.I.C.G.S.X.
0.046e-1321619466_atVitis viniferaCF511448--6e-2At5g45290zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.092e-548Zm.17215.1.A1_atZea maysCO523350RING zinc finger protein-like-2e+0At5g5144023.5 kDa mitochondrial small heat shock protein (HSP23.5-M)O.I.C.G.S.X.

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