Homology analysis

Gene ID Ta.8245.2.S1_x_at
Gene name
Functional description Similar to At5g13570: DCP2 (DECAPPING 2) (Ev=4e+0)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.900775Ta.8245.2.S1_atCA680416--4e+0At5g13570DCP2 (DECAPPING 2)O.I.C.G.S.X.
0.330674Ta.8245.1.S1_atCD922906--2e-35At1g0481026S proteasome regulatory subunit, putativeO.I.C.G.S.X.
0.126e-21101Ta.8245.3.S1_atCA661439--1e+0At2g32360ubiquitin family proteinO.I.C.G.S.X.
0.126e-21101Ta.8245.3.S1_a_atCA661439--1e+0At2g32360ubiquitin family proteinO.I.C.G.S.X.
0.126e-21101Ta.8245.3.S1_x_atCA661439--1e+0At2g32360ubiquitin family proteinO.I.C.G.S.X.
0.021e+034Ta.1595.1.S1_atBQ801056--6e-1At3g47440TIP5O.I.C.G.S.X.
0.035e+032TaAffx.78655.1.S1_atCA729583--2e+1Atcg00160-O.I.C.G.S.X.
0.035e+032TaAffx.78655.1.S1_x_atCA729583--2e+1Atcg00160-O.I.C.G.S.X.
0.035e+032TaAffx.29561.1.S1_atCA639993--9e-1At4g32105galactosyltransferaseO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.024e+032At5g13570Arabidopsis thaliana831201DCP2 (DECAPPING 2)Encodes DCP2 with mRNA decapping activity. DCP2 forms a mRNA decapping complex with DCP1 (At1g08370) and VCS (VARICOSE) (At3g13300). Recombinant DCP2 is enzymatically active in vitro, generating from capped mRNAs m7GDP, and 5-phosphorylated mRNAs. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP1.---O.I.C.G.S.X.
0.032e+034PsAffx.psMY009iF05r_s_atGlycine maxPsAffx.psMY009iF05r--4e+0At5g28615-O.I.C.G.S.X.
0.353e-141500Contig9627_atHordeum vulgareContig9627--3e-31At2g3273026S proteasome regulatory subunit, putativeO.I.C.G.S.X.
0.046e-136OsAffx.15291.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.036e+032PtpAffx.71160.1.S1_atPopulus trichocarpaCK107602hypothetical protein-1e+0Atcg00330-O.I.C.G.S.X.
0.038e-2361612089_atVitis viniferaCF212718--2e+0At5g12235CLE22 (CLAVATA3/ESR-RELATED 22)O.I.C.G.S.X.
0.048e-650Zm.2706.1.A1_atZea maysBM335618--3e-43At2g3273026S proteasome regulatory subunit, putativeO.I.C.G.S.X.



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