Homology analysis

Gene ID Ta.7311.1.S1_at
Gene name
Functional description Similar to At2g45140: PVA12 (PLANT VAP HOMOLOG 12) (Ev=2e-1)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.8602641Ta.7311.1.S1_x_atCK196830--2e-1At2g45140PVA12 (PLANT VAP HOMOLOG 12)O.I.C.G.S.X.
0.360642Ta.7311.3.S1_a_atCA639744--7e-2At2g45140PVA12 (PLANT VAP HOMOLOG 12)O.I.C.G.S.X.
0.022e-138TaAffx.86388.1.S1_atCA609704--2e+1At5g0709040S ribosomal protein S4 (RPS4B)O.I.C.G.S.X.
0.029e-136TaAffx.97873.1.S1_atBJ268431--2e+0At4g25220transporter, putativeO.I.C.G.S.X.
0.029e-136Ta.1578.1.S1_atBE445776--9e-1At5g12235CLE22 (CLAVATA3/ESR-RELATED 22)O.I.C.G.S.X.
0.019e-136Ta.1453.1.S1_a_atBE429897--2e-15At3g58140phenylalanyl-tRNA synthetase class IIc family proteinO.I.C.G.S.X.
0.024e+034TaAffx.86810.1.S1_atCA600264--2e-1At3g43583unknown proteinO.I.C.G.S.X.
0.024e+034TaAffx.57263.1.S1_s_atCD930219--5e+0At4g36900RAP2.10 (related to AP2 10)O.I.C.G.S.X.
0.014e+034TaAffx.38380.1.S1_atBJ240779--5e+0At3g61900auxin-responsive family proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.032e-138At2g45140Arabidopsis thaliana819122PVA12 (PLANT VAP HOMOLOG 12)Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.---O.I.C.G.S.X.
0.032e-552Gma.733.2.S1_a_atGlycine maxAW703939--2e-7At3g60600VAP (VESICLE ASSOCIATED PROTEIN)O.I.C.G.S.X.
0.7801245Contig5361_atHordeum vulgareContig5361--3e+0At4g29103unknown proteinO.I.C.G.S.X.
0.374e-100367Os01g0936800Oryza sativaAK103322.1-Major sperm protein domain containing protein6e-2At5g47180vesicle-associated membrane family protein / VAMP family proteinO.I.C.G.S.X.
0.053e-448PtpAffx.6641.2.S1_atPopulus trichocarpaCK103735--3e-7At1g08820VAP27-2 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2)O.I.C.G.S.X.
0.027e-2381620743_atVitis viniferaCF610054hypothetical protein LOC100241913-4e-1At5g47180vesicle-associated membrane family protein / VAMP family proteinO.I.C.G.S.X.
0.177e-55214Zm.2640.1.A1_atZea maysCF628991hypothetical protein LOC100217097-1e-1At5g27400unknown proteinO.I.C.G.S.X.



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