Homology analysis

Gene ID Ta.4661.1.S1_s_at
Gene name
Functional description Similar to At5g47010: LBA1 (LOW-LEVEL BETA-AMYLASE 1) (Ev=2e-27)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.9802926Ta.4661.1.S1_atBG314545--2e-27At5g47010LBA1 (LOW-LEVEL BETA-AMYLASE 1)O.I.C.G.S.X.
0.380724Ta.19524.1.A1_atCA653004--5e+0At5g09240transcriptional coactivator p15 (PC4) family proteinO.I.C.G.S.X.
0.021e+036Ta.24211.1.A1_atBJ253644--4e+0At5g12880proline-rich family proteinO.I.C.G.S.X.
0.015e+034TaAffx.79038.1.S1_atCA723461--2e-1At2g20520FLA6 (FASCICLIN-LIKE ARABINOGALACTAN 6)O.I.C.G.S.X.
0.015e+034TaAffx.3160.1.S1_atCA659246--2e-2At1g26810GALT1 (GALACTOSYLTRANSFERASE1)O.I.C.G.S.X.
0.015e+034Ta.4113.1.S1_atCA717239--2e-1At3g61750auxin-responsive protein -relatedO.I.C.G.S.X.
0.015e+034Ta.18134.1.S1_atAL826456--4e+0At1g10220-O.I.C.G.S.X.
0.012e+132TaAffx.96285.1.A1_atBE418164--9e-1At5g54540-O.I.C.G.S.X.
0.012e+132TaAffx.85802.8.S1_atCA621855--4e-34At1g14320SAC52 (SUPPRESSOR OF ACAULIS 52)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.122e-27125At5g47010Arabidopsis thaliana834747LBA1 (LOW-LEVEL BETA-AMYLASE 1)Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes.---O.I.C.G.S.X.
0.022e+036Gma.5646.1.S1_atGlycine maxBM177914--2e-7At5g47010LBA1 (LOW-LEVEL BETA-AMYLASE 1)O.I.C.G.S.X.
0.7701041Contig6248_atHordeum vulgareContig6248--2e-67At5g47010LBA1 (LOW-LEVEL BETA-AMYLASE 1)O.I.C.G.S.X.
0.426e-106387Os07g0495900Oryza sativaAK060293.1-Regulator of nonsense transcripts 1 homolog1e-6At5g47010LBA1 (LOW-LEVEL BETA-AMYLASE 1)O.I.C.G.S.X.
0.012e+036PtpAffx.61209.1.A1_atPopulus trichocarpaDN489767--2e-2At1g12244DNA binding / hydrolase, acting on ester bonds / nuclease/ nucleic acid binding / recombinaseO.I.C.G.S.X.
0.125e-221051616112_atVitis viniferaCF512953hypothetical protein LOC100264343-6e-73At5g47010LBA1 (LOW-LEVEL BETA-AMYLASE 1)O.I.C.G.S.X.
0.308e-71268Zm.13723.2.A1_atZea maysCD978469--3e+0At2g22201unknown proteinO.I.C.G.S.X.



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