Homology analysis

Gene ID Ta.3678.1.S1_at
Gene name MutS homolog 7
Functional description Similar to At3g24495: MSH7 (MUTS HOMOLOG 7) (Ev=1e-26)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.015e-138Ta.3677.1.S1_atAF408844.1sucrose transporter SUT1A-5e+0At5g43610ATSUC6 (Sucrose-proton symporter 6)O.I.C.G.S.X.
0.015e-138Ta.2412.1.S1_x_atCD898752--9e-6At4g32260ATP synthase familyO.I.C.G.S.X.
0.015e-138Ta.2412.1.S1_atCD898752--9e-6At4g32260ATP synthase familyO.I.C.G.S.X.
0.012e+036TaAffx.92577.1.S1_atBJ258339calcium-dependent protein kinase-2e-5At5g12180CPK17O.I.C.G.S.X.
0.012e+036TaAffx.596.1.S1_atBQ168986--2e+0At2g45670calcineurin B subunit-relatedO.I.C.G.S.X.
0.012e+036TaAffx.54675.1.S1_atCA678448--2e-1At2g41225unknown proteinO.I.C.G.S.X.
0.012e+036Ta.9374.1.S1_a_atCD373994--7e-1At5g46840RNA recognition motif (RRM)-containing proteinO.I.C.G.S.X.
0.012e+036Ta.9374.1.S1_atCD373994--7e-1At5g46840RNA recognition motif (RRM)-containing proteinO.I.C.G.S.X.
0.012e+036Ta.2592.1.S1_atCK200326--7e-5At3g16480MPPalpha (mitochondrial processing peptidase alpha subunit)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.121e-26123At3g24495Arabidopsis thaliana822040MSH7 (MUTS HOMOLOG 7)encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.---O.I.C.G.S.X.
0.012e-140HgAffx.15990.1.S1_atGlycine maxCB374152--4e+0At2g34740catalytic/ protein serine/threonine phosphataseO.I.C.G.S.X.
0.014e-344Contig4612_atHordeum vulgareContig4612--4e+0At5g43610ATSUC6 (Sucrose-proton symporter 6)O.I.C.G.S.X.
0.630726Os01g0180600Oryza sativaNM_189554.1-MutS homolog 7 (Fragment)1e-10At3g24495MSH7 (MUTS HOMOLOG 7)O.I.C.G.S.X.
0.124e-42174PtpAffx.216978.1.S1_atPopulus trichocarpapmrna32066hypothetical protein-2e-40At3g24495MSH7 (MUTS HOMOLOG 7)O.I.C.G.S.X.
0.011e-1381618425_atVitis viniferaBQ795646beta 1-3 glucanase-6e-1At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)O.I.C.G.S.X.
0.470797Zm.216.1.S1_atZea maysAJ238787.1MutS homolog2-2e-18At3g24495MSH7 (MUTS HOMOLOG 7)O.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage