CoP: Co-expressed Biological Processes

Homology analysis

Gene ID Ta.28850.1.S1_at

Gene name

Functional description Similar to At3g09840: CDC48 (CELL DIVISION CYCLE 48) (Ev=1e-167)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.18	9e-107	389	TaAffx.7295.1.S1_at	CA683289	-	-	4e+0	At5g18920	unknown protein	O.I.	C.G.	S.X.
0.15	1e-87	325	TaAffx.7295.2.S1_at	CA662724	-	-	7e-2	At3g09840	CDC48 (CELL DIVISION CYCLE 48)	O.I.	C.G.	S.X.
0.08	9e-27	123	TaAffx.112549.1.S1_at	CA623060	-	-	3e-12	At3g53230	cell division cycle protein 48, putative / CDC48, putative	O.I.	C.G.	S.X.
0.10	1e-13	79	TaAffx.53049.1.S1_at	CA697209	-	-	4e+0	At5g14010	zinc finger (C2H2 type) family protein	O.I.	C.G.	S.X.
0.01	3e-5	52	Ta.30798.3.S1_at	CK193564	-	-	1e-9	At4g32940	GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME)	O.I.	C.G.	S.X.
0.01	4e-4	48	Ta.1709.1.S1_at	CK208738	-	-	2e-53	At2g27600	SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)	O.I.	C.G.	S.X.
0.01	4e-4	48	Ta.1709.1.S1_x_at	CK208738	-	-	2e-53	At2g27600	SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)	O.I.	C.G.	S.X.
0.02	2e-3	46	Ta.25112.1.A1_at	CA602848	-	-	3e-1	At1g79610	sodium proton exchanger, putative (NHX6)	O.I.	C.G.	S.X.
0.01	2e-3	46	Ta.1709.2.S1_a_at	CA611032	-	-	6e-57	At2g27600	SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.61	1e-167	591	At3g09840	Arabidopsis thaliana	820142	CDC48 (CELL DIVISION CYCLE 48)	Encodes a cell division cycle protein, a member of AAA-type ATPases gene family. Expressed throughout the plant in regions of cell division. Within the cell, sub-cellular localization varies depending on the stage of the cell cycle.Mutants in which the expression of CDC48A is altered show defects in cytokinesis, cell expansion and cell differentiation.	-	-	-	O.I.	C.G.	S.X.
0.50	8e-142	506	Gma.4013.1.S1_at	Glycine max	U20213.1	plamsma membrane-associated AAA-ATPase	-	0	At5g03340	cell division cycle protein 48, putative / CDC48, putative	O.I.	C.G.	S.X.
0.41	0	860	Contig2036_s_at	Hordeum vulgare	Contig2036	-	-	8e-18	At3g53230	cell division cycle protein 48, putative / CDC48, putative	O.I.	C.G.	S.X.
0.73	0	2482	Os03g0151800	Oryza sativa	AK098980.1	-	Cell division control protein 48 homolog A(AtCDC48a)	0	At3g09840	CDC48 (CELL DIVISION CYCLE 48)	O.I.	C.G.	S.X.
0.42	9e-117	422	Ptp.4616.1.S1_at	Populus trichocarpa	BP924637	hypothetical protein	-	0	At5g03340	cell division cycle protein 48, putative / CDC48, putative	O.I.	C.G.	S.X.
0.23	2e-77	289	1610290_at	Vitis vinifera	CD720110	-	-	2e-132	At5g03340	cell division cycle protein 48, putative / CDC48, putative	O.I.	C.G.	S.X.
0.69	0	1739	Zm.1177.1.S1_at	Zea mays	AY105040.1	hypothetical protein LOC100274218	-	3e-112	At5g03340	cell division cycle protein 48, putative / CDC48, putative	O.I.	C.G.	S.X.

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