CoP: Co-expressed Biological Processes

Homology analysis

Gene ID Ta.27923.2.S1_x_at

Gene name small subunit

Functional description Similar to At1g67090: RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) (Ev=3e-14)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.67	0	1011	Ta.2752.3.S1_x_at	BJ266715	ribulosebisphosphate carboxylase small subunit	-	8e-12	At1g67090	RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)	O.I.	C.G.	S.X.
0.59	0	971	Ta.2752.2.S1_x_at	BE216923	-	-	6e-13	At1g67090	RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)	O.I.	C.G.	S.X.
0.46	2e-169	595	Ta.2752.1.A1_x_at	CA680240	ribulosebisphosphate carboxylase small subunit	-	7e-9	At1g67090	RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)	O.I.	C.G.	S.X.
0.46	2e-169	595	Ta.2752.1.S1_x_at	BE213237	ribulosebisphosphate carboxylase small subunit	-	7e-9	At1g67090	RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)	O.I.	C.G.	S.X.
0.46	2e-169	595	Ta.2752.1.A1_at	CA680240	ribulosebisphosphate carboxylase small subunit	-	7e-9	At1g67090	RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)	O.I.	C.G.	S.X.
0.16	7e-105	381	Ta.30808.1.S1_s_at	CK211832	-	-	4e-15	At3g26650	GAPA (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT)	O.I.	C.G.	S.X.
0.37	2e-83	309	TaAffx.28584.1.S1_x_at	CA658565	-	-	4e+0	At5g48485	DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1)	O.I.	C.G.	S.X.
0.34	9e-52	204	TaAffx.113948.1.S1_at	CA600925	-	-	2e+1	At5g21170	5'-AMP-activated protein kinase beta-2 subunit, putative	O.I.	C.G.	S.X.
0.10	3e-51	202	Ta.25199.1.S1_at	CA735628	-	-	6e-1	At1g49290	unknown protein	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.23	3e-14	79	At1g67090	Arabidopsis thaliana	843029	RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)	F:ribulose-bisphosphate carboxylase activity, copper ion binding;P:response to blue light, response to cold, carbon utilization by fixation of carbon dioxide, response to red light, response to far red light;C:in 10 components;POB	-	-	-	O.I.	C.G.	S.X.
0.15	1e-11	71	Gma.289.1.S1_x_at	Glycine max	AF303941.1	ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 /// ribulose-1,5-bisphosphate carboxylase small subunit /// ribulose-1,5-bisphosphate carboxylase small subunit	-	7e-34	At1g67090	RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)	O.I.	C.G.	S.X.
0.55	1e-153	541	Contig965_at	Hordeum vulgare	Contig965	-	-	6e-5	At5g38410	ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)	O.I.	C.G.	S.X.
0.38	4e-83	309	Os12g0291400	Oryza sativa	CB682251	-	Ribulose-1,5-bisphosphate carboxylase/oxygenasesmall subunit (Fragment)	4e-5	At5g38410	ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)	O.I.	C.G.	S.X.
0.16	2e-4	48	PtpAffx.249.460.S1_at	Populus trichocarpa	AJ773062	hypothetical protein	-	2e-11	At1g67090	RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)	O.I.	C.G.	S.X.
0.22	3e-24	111	1613936_x_at	Vitis vinifera	CF568996	-	-	8e-24	At5g38410	ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)	O.I.	C.G.	S.X.
0.26	4e-24	111	Zm.6763.4.S1_at	Zea mays	BG841872	hypothetical protein LOC100279574	-	8e-6	At1g67090	RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)	O.I.	C.G.	S.X.

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