Back to the CoP portal site
Back to the KAGIANA project homepage
| Gene ID | Ta.23397.2.S1_x_at |
| Gene name | |
| Functional description | Similar to At2g21660: CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2) (Ev=1e-1) |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.83 | 0 | 882 | Ta.23397.2.S1_at | CA718270 | - | - | 1e-1 | At2g21660 | CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2) | O.I. | C.G. | S.X. | |
| 0.75 | 6e-130 | 464 | Ta.23397.1.S1_x_at | BJ292777 | - | - | 3e-2 | At4g33660 | unknown protein | O.I. | C.G. | S.X. | |
| 0.17 | 3e-24 | 113 | Ta.4900.1.S1_at | BJ232326 | - | - | 1e-3 | At4g38680 | GRP2 (GLYCINE RICH PROTEIN 2) | O.I. | C.G. | S.X. | |
| 0.19 | 3e-18 | 93 | Ta.5103.1.S1_at | BJ271759 | - | - | 1e-3 | At4g38680 | GRP2 (GLYCINE RICH PROTEIN 2) | O.I. | C.G. | S.X. | |
| 0.10 | 2e-16 | 87 | Ta.28886.1.S1_at | CA700076 | - | - | 4e+0 | At5g55570 | unknown protein | O.I. | C.G. | S.X. | |
| 0.14 | 6e-16 | 85 | Ta.5839.1.S1_x_at | BJ291864 | - | - | 9e-2 | At3g05675 | protein binding | O.I. | C.G. | S.X. | |
| 0.14 | 6e-16 | 85 | Ta.5839.1.S1_at | BJ291864 | - | - | 9e-2 | At3g05675 | protein binding | O.I. | C.G. | S.X. | |
| 0.23 | 1e-14 | 81 | Ta.4871.1.A1_at | BE430201 | - | - | 2e+0 | At3g44590 | 60S acidic ribosomal protein P2 (RPP2D) | O.I. | C.G. | S.X. | |
| 0.17 | 6e-13 | 75 | Ta.6187.1.S1_x_at | BQ167028 | - | - | 3e-1 | At5g04030 | unknown protein | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.06 | 1e-1 | 38 | At2g21660 | Arabidopsis thaliana | 816705 | CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2) | Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). | - | - | - | O.I. | C.G. | S.X. | |
| 0.02 | 1e-2 | 42 | PsAffx.C144000037_at | Glycine max | PsAffx.C144000037 | - | - | 2e-3 | At4g33660 | unknown protein | O.I. | C.G. | S.X. | |
| 0.56 | 4e-83 | 307 | Contig1071_s_at | Hordeum vulgare | Contig1071 | - | - | 5e-3 | At5g19090 | heavy-metal-associated domain-containing protein | O.I. | C.G. | S.X. | |
| 0.08 | 4e-6 | 54 | Os02g0587000 | Oryza sativa | AK062460.1 | - | Glycine-rich protein | 6e+0 | At1g30515 | unknown protein | O.I. | C.G. | S.X. | |
| 0.07 | 2e-1 | 38 | PtpAffx.224082.1.S1_x_at | Populus trichocarpa | pmrna42319 | hypothetical protein | - | 1e-2 | At5g61030 | GR-RBP3 (glycine-rich RNA-binding protein 3) | O.I. | C.G. | S.X. | |
| 0.03 | 9e-3 | 40 | 1612137_s_at | Vitis vinifera | CF604545 | hypothetical protein LOC100262769 | - | 3e-1 | At3g25850 | DC1 domain-containing protein | O.I. | C.G. | S.X. | |
| 0.05 | 2e-8 | 59 | Zm.2147.2.A1_at | Zea mays | BM341580 | - | - | 1e+0 | At5g17210 | unknown protein | O.I. | C.G. | S.X. |
Back to the CoP portal site
Back to the KAGIANA project homepage