Homology analysis

Gene ID Ta.12414.1.S1_at
Gene name
Functional description Similar to At5g23880: CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100) (Ev=2e-9)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.107e-652Ta.26705.1.S1_atCD491625--6e+0At2g20700unknown proteinO.I.C.G.S.X.
0.034e-136TaAffx.110804.1.S1_atCA654042--4e+0At3g60600VAP (VESICLE ASSOCIATED PROTEIN)O.I.C.G.S.X.
0.024e-136Ta.13164.1.S1_atBQ171469--4e-2At5g08790ATAF2O.I.C.G.S.X.
0.032e+034TaAffx.132745.2.S1_atBQ608683--4e+0At1g63960unknown proteinO.I.C.G.S.X.
0.012e+034Ta.9254.1.S1_atCD932508--9e-10At3g08910DNAJ heat shock protein, putativeO.I.C.G.S.X.
0.032e+034Ta.8349.1.A1_atBQ161772--8e-2At5g11930glutaredoxin family proteinO.I.C.G.S.X.
0.012e+034Ta.5367.1.S1_s_atCK193816NAC domain transcription factor-1e-3At1g01720ATAF1O.I.C.G.S.X.
0.026e+032TaAffx.65104.1.S1_atBJ261522--2e+0At3g12120FAD2 (FATTY ACID DESATURASE 2)O.I.C.G.S.X.
0.026e+032TaAffx.43302.1.A1_atBJ265059--4e+0At5g63168unknown proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.042e-963At5g23880Arabidopsis thaliana832453CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus.---O.I.C.G.S.X.
0.035e-136GmaAffx.6759.1.S1_atGlycine maxBG157605--2e+0At1g08280glycosyl transferase family 29 protein / sialyltransferase family proteinO.I.C.G.S.X.
0.720722Contig16128_atHordeum vulgareContig16128--7e-15At5g23880CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)O.I.C.G.S.X.
0.223e-108393Os09g0569400Oryza sativaAK063384.1-RNA-metabolising metallo-beta-lactamase domaincontaining protein7e-21At5g23880CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)O.I.C.G.S.X.
0.104e-1479PtpAffx.103932.1.S1_atPopulus trichocarpaCX175756--5e-20At5g23880CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)O.I.C.G.S.X.
0.032e+0321614756_atVitis viniferaCB003977--3e-1At1g26761unknown proteinO.I.C.G.S.X.
0.157e-754Zm.4238.1.A1_atZea maysBM073006cleavage and polyadenylation specificity factor, 100 kDa subunit-8e-1At2g14282SCRL18 (SCR-Like 18)O.I.C.G.S.X.



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