CoP: Co-expressed Biological Processes

Homology analysis

Gene ID PtpAffx.61544.1.A1_at

Gene name hypothetical protein

Functional description Similar to At3g59380: FTA (FARNESYLTRANSFERASE A) (Ev=4e-19)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.03	2e+0	34	PtpAffx.84481.1.A1_at	CV246111	-	-	1e-10	At1g61860	protein kinase, putative	O.I.	C.G.	S.X.
0.03	2e+0	34	PtpAffx.54763.1.A1_at	DN488821	-	-	4e+0	At5g22830	ATMGT10 (MAGNESIUM (MG) TRANSPORTER 10)	O.I.	C.G.	S.X.
0.02	2e+0	34	PtpAffx.215026.1.S1_s_at	pmrna28973	hypothetical protein	-	4e-1	At3g08580	AAC1 (ADP/ATP CARRIER 1)	O.I.	C.G.	S.X.
0.01	2e+0	34	PtpAffx.213396.1.S1_at	pmrna26208	hypothetical protein	-	2e-33	At3g05680	EMB2016 (embryo defective 2016)	O.I.	C.G.	S.X.
0.02	2e+0	34	PtpAffx.116521.1.S1_at	DN486954	-	-	2e+0	At4g19070	cadmium-responsive protein / cadmium induced protein (AS8)	O.I.	C.G.	S.X.
0.02	7e+0	32	PtpAffx.60031.1.S1_at	DN498750	hypothetical protein	-	3e-24	At5g15860	ATPCME (PRENYLCYSTEINE METHYLESTERASE)	O.I.	C.G.	S.X.
0.02	7e+0	32	PtpAffx.57143.1.A1_at	CV237216	hypothetical protein	-	4e-8	At1g50020	unknown protein	O.I.	C.G.	S.X.
0.03	7e+0	32	PtpAffx.50257.1.A1_s_at	CV252700	hypothetical protein	-	7e-1	At1g55990	glycine-rich protein	O.I.	C.G.	S.X.
0.03	7e+0	32	PtpAffx.224472.1.S1_at	pmrna43036	-	-	3e-1	At3g47470	LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4)	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.22	4e-19	95	At3g59380	Arabidopsis thaliana	825107	FTA (FARNESYLTRANSFERASE A)	Encodes the alpha-subunit shared between protein farnesyltransferase and protein geranylgeranyltransferase-I. Involved in protein prenylation: covalent attachment of the C-15 isoprene farnesyl or the C-20 isoprene geranylgeranyl groups to the C-terminal end of some proteins. Involved in shoot and flower meristem homeostasis, and response to ABA and drought. Also regulates leaf cell shape. Mutant is epistatic to era1.	-	-	-	O.I.	C.G.	S.X.
0.17	2e-6	54	GmaAffx.56889.1.S1_s_at	Glycine max	AW781023	-	-	3e-7	At3g59380	FTA (FARNESYLTRANSFERASE A)	O.I.	C.G.	S.X.
0.03	3e-3	42	Contig12731_at	Hordeum vulgare	Contig12731	-	-	2e-4	At3g59380	FTA (FARNESYLTRANSFERASE A)	O.I.	C.G.	S.X.
0.10	3e-12	73	Os09g0514400	Oryza sativa	AK060892.1	-	Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit (EC2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase alphasubunit) (Ras proteins prenyltransferase alpha)(FTase-alpha) (Type I protein geranyl-geranyltransferasealpha subunit) (GGTase-I-alpha)	7e-4	At3g59380	FTA (FARNESYLTRANSFERASE A)	O.I.	C.G.	S.X.
0.03	1e-3	44	Ta.27161.1.S1_at	Triticum aestivum	CK161726	-	-	5e-4	At3g59380	FTA (FARNESYLTRANSFERASE A)	O.I.	C.G.	S.X.
0.03	2e+0	32	1619014_at	Vitis vinifera	CB343548	-	-	1e+0	At2g46280	TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1)	O.I.	C.G.	S.X.
0.02	9e+0	30	Zm.5557.1.A1_at	Zea mays	CD573414	hypothetical protein LOC100279552	-	1e+0	At5g24890	unknown protein	O.I.	C.G.	S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage