Homology analysis
Gene ID
PtpAffx.28701.2.S1_s_at
Gene name
hypothetical protein
Functional description
Similar to At5g01520: zinc finger (C3HC4-type RING finger) family protein (
Ev
=1e-13)
Click
gene/probe ID
to show a list of genes that are homologous to the gene.
Paralogous genes
HF
Ev
BS
Gene ID
Repr. ID
Gene Name
Functional Description
Ev
AGI code
Arabidopsis gene name
O.I.
C.G.
S.X.
Other DB
0.66
0
1009
PtpAffx.213622.1.S1_at
pmrna26602
hypothetical protein
-
3e-18
At5g58787
zinc finger (C3HC4-type RING finger) family protein
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.52
0
686
PtpAffx.28701.1.S1_at
CV266295
hypothetical protein
-
2e-13
At5g01520
zinc finger (C3HC4-type RING finger) family protein
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.22
4e-11
69
PtpAffx.215492.1.S1_at
pmrna29719
hypothetical protein
-
5e-4
At3g47160
protein binding / zinc ion binding
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.22
4e-11
69
PtpAffx.215492.1.S1_x_at
pmrna29719
hypothetical protein
-
5e-4
At3g47160
protein binding / zinc ion binding
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.22
4e-11
69
PtpAffx.215492.1.S1_s_at
pmrna29719
hypothetical protein
-
5e-4
At3g47160
protein binding / zinc ion binding
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.25
1e-10
67
PtpAffx.117895.1.S1_at
BU879218
hypothetical protein
-
1e-10
At5g58787
zinc finger (C3HC4-type RING finger) family protein
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.14
6e-10
65
PtpAffx.118422.2.S1_a_at
CK091385
hypothetical protein
-
1e-19
At3g47160
protein binding / zinc ion binding
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.04
2e-3
44
PtpAffx.208640.1.S1_at
pmrna17150
hypothetical protein
-
9e-2
At5g01520
zinc finger (C3HC4-type RING finger) family protein
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.01
5e-1
36
PtpAffx.4886.1.S1_a_at
CV263548
hypothetical protein
-
1e-6
At2g38780
unknown protein
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
Orthologous genes
HF
Ev
BS
Gene ID
Organism
Repr. ID
Gene Name
Functional Description
Ev
AGI code
Arabidopsis gene name
O.I.
C.G.
S.X.
Other DB
0.23
1e-13
77
At5g01520
Arabidopsis thaliana
831747
zinc finger (C3HC4-type RING finger) family protein
F:protein binding, zinc ion binding;P:unknown;C:unknown;MOPVF
-
-
-
O.I.
C.G.
S.X.
Please select
ath
TAIR (integral)
ath,osa
KEGG (integral)
ath
PlantTribes (integral)
ath,osa
Gramene (integral)
ath
MPSS (genome)
ath
InParanoid (ortholog)
ath
Plant RBP (ortholog)
ath
SIGnAL (T-DNA)
ath
RAFL (full-length clone)
ath
AtGDB (genome)
ath
Genevestigator (expression)
ath,ptr
eFP Browser (expression)
ath
AVT (expression)
ath
ATTED-II (co-expression)
ath
AtcisDB (cis-element)
ath
SUBA (hydropathy)
ath
AtProteome
ath
Plant Proteome Database
ath
PMN (pathway)
ath,osa
KaPPA-View 4 (pathway)
ath
RnR (over-expression)
ath
iHOP (report)
0.27
1e-23
111
GmaAffx.60268.1.S1_at
Glycine max
BM732712
-
-
4e-15
At5g01520
zinc finger (C3HC4-type RING finger) family protein
O.I.
C.G.
S.X.
Please select
0.10
2e-7
56
Contig19_s_at
Hordeum vulgare
Contig19
-
-
4e-5
At5g58787
zinc finger (C3HC4-type RING finger) family protein
O.I.
C.G.
S.X.
Please select
0.13
3e-6
54
Os.25027.3.S1_at
Oryza sativa
-
-
-
0
O.I.
C.G.
S.X.
Please select
ath,osa
KEGG (integral)
ath,osa
Gramene (integral)
ath,osa
KaPPA-View 4 (pathway)
0.09
4e-7
56
Ta.5457.1.S1_at
Triticum aestivum
BJ283633
-
-
5e-5
At5g58787
zinc finger (C3HC4-type RING finger) family protein
O.I.
C.G.
S.X.
Please select
0.12
8e-15
79
1610231_at
Vitis vinifera
CF200895.1
-
-
7e-2
At5g58787
zinc finger (C3HC4-type RING finger) family protein
O.I.
C.G.
S.X.
Please select
0.12
4e-8
57
Zm.5210.1.A1_at
Zea mays
AY105141.1
IDP2492 protein
-
7e-4
At3g47160
protein binding / zinc ion binding
O.I.
C.G.
S.X.
Please select
Back to the
CoP portal site
Back to the
KAGIANA project homepage