Homology analysis
Gene ID
PtpAffx.201979.1.S1_at
Gene name
hypothetical protein
Functional description
Similar to At3g57230: AGL16 (AGAMOUS-LIKE 16) (
Ev
=3e-26)
Click
gene/probe ID
to show a list of genes that are homologous to the gene.
Paralogous genes
HF
Ev
BS
Gene ID
Repr. ID
Gene Name
Functional Description
Ev
AGI code
Arabidopsis gene name
O.I.
C.G.
S.X.
Other DB
1.00
0
1362
PtpAffx.201979.1.S1_x_at
pmrna3951
hypothetical protein
-
3e-26
At3g57230
AGL16 (AGAMOUS-LIKE 16)
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.89
0
753
PtpAffx.205416.1.S1_at
pmrna10719
hypothetical protein
-
2e-21
At3g57230
AGL16 (AGAMOUS-LIKE 16)
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.12
1e-10
67
PtpAffx.204772.1.S1_at
pmrna9397
hypothetical protein
-
1e-25
At2g14210
AGL44 (AGAMOUS-LIKE 44)
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.34
2e-9
63
PtpAffx.201225.1.S1_s_at
pmrna2438
hypothetical protein
-
6e-24
At2g14210
AGL44 (AGAMOUS-LIKE 44)
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.30
2e-9
63
PtpAffx.201227.1.S1_at
pmrna2440
hypothetical protein
-
7e-24
At2g14210
AGL44 (AGAMOUS-LIKE 44)
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.04
2e-6
54
Ptp.3453.1.S1_at
CV243068
MIKC mads-box transcription factor
-
3e-21
At4g11880
AGL14 (agamous-like 14)
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.05
8e-6
52
PtpAffx.92754.1.S1_at
CK096310
hypothetical protein
-
6e-10
At5g62165
AGL42 (AGAMOUS LIKE 42)
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.06
8e-6
52
PtpAffx.56981.3.S1_at
CV242364
MIKC mads-box transcription factor SOC1
-
4e-23
At4g11880
AGL14 (agamous-like 14)
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.04
1e-4
48
PtpAffx.99434.1.S1_at
CV245843
hypothetical protein
-
6e-31
At4g11880
AGL14 (agamous-like 14)
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
Orthologous genes
HF
Ev
BS
Gene ID
Organism
Repr. ID
Gene Name
Functional Description
Ev
AGI code
Arabidopsis gene name
O.I.
C.G.
S.X.
Other DB
0.43
3e-26
119
At3g57230
Arabidopsis thaliana
824890
AGL16 (AGAMOUS-LIKE 16)
MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes.
-
-
-
O.I.
C.G.
S.X.
Please select
ath
TAIR (integral)
ath,osa
KEGG (integral)
ath
PlantTribes (integral)
ath,osa
Gramene (integral)
ath
MPSS (genome)
ath
InParanoid (ortholog)
ath
Plant RBP (ortholog)
ath
SIGnAL (T-DNA)
ath
RAFL (full-length clone)
ath
AtGDB (genome)
ath
Genevestigator (expression)
ath,ptr
eFP Browser (expression)
ath
AVT (expression)
ath
ATTED-II (co-expression)
ath
AtcisDB (cis-element)
ath
SUBA (hydropathy)
ath
AtProteome
ath
Plant Proteome Database
ath
PMN (pathway)
ath,osa
KaPPA-View 4 (pathway)
ath
RnR (over-expression)
ath
iHOP (report)
0.30
9e-12
71
GmaAffx.71421.1.S1_at
Glycine max
AW706936
-
-
4e-21
At2g14210
AGL44 (AGAMOUS-LIKE 44)
O.I.
C.G.
S.X.
Please select
0.05
4e-5
48
Contig6954_at
Hordeum vulgare
Contig6954
-
-
5e-1
At3g17330
ECT6 (evolutionarily conserved C-terminal region 6)
O.I.
C.G.
S.X.
Please select
0.25
1e-14
81
Os02g0579600
Oryza sativa
AY177696.1
-
Transcription factor MADS27
7e-19
At3g57230
AGL16 (AGAMOUS-LIKE 16)
O.I.
C.G.
S.X.
Please select
ath,osa
KEGG (integral)
ath,osa
Gramene (integral)
ath,osa
KaPPA-View 4 (pathway)
0.08
6e-6
52
TaAffx.1124.1.S1_at
Triticum aestivum
BJ233977
-
-
1e+0
At2g22120
protein binding / zinc ion binding
O.I.
C.G.
S.X.
Please select
0.04
2e-3
42
1621827_at
Vitis vinifera
CF373383
similar to flowering locus C-like MADS-box protein
-
4e-11
At2g45650
AGL6 (AGAMOUS-LIKE 6)
O.I.
C.G.
S.X.
Please select
0.23
1e-29
129
Zm.15206.1.A1_at
Zea mays
BM268642
-
-
6e-18
At3g57230
AGL16 (AGAMOUS-LIKE 16)
O.I.
C.G.
S.X.
Please select
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