Homology analysis

Gene ID PtpAffx.158573.1.S1_at
Gene name hypothetical protein
Functional description Similar to At5g17790: VAR3 (VARIEGATED 3) (Ev=1e-3)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.184e-60232Ptp.1746.1.A1_atCV236183hypothetical protein-2e+0At5g17790VAR3 (VARIEGATED 3)O.I.C.G.S.X.
0.015e-136PtpAffx.210618.1.S1_atpmrna20828hypothetical protein-1e-9At3g48430REF6 (RELATIVE OF EARLY FLOWERING 6)O.I.C.G.S.X.
0.025e-136PtpAffx.203906.1.S1_atpmrna7716hypothetical protein-1e-5At2g44450BGLU15 (BETA GLUCOSIDASE 15)O.I.C.G.S.X.
0.022e+034PtpAffx.77158.2.S1_a_atAJ772078shikimate kinase-1e-16At3g26900shikimate kinase family proteinO.I.C.G.S.X.
0.012e+034PtpAffx.209267.1.S1_atpmrna18311hypothetical protein-4e-3At1g71020armadillo/beta-catenin repeat family protein / U-box domain-containing proteinO.I.C.G.S.X.
0.012e+034PtpAffx.207774.1.S1_atpmrna15459hypothetical protein-7e-5At1g23030armadillo/beta-catenin repeat family protein / U-box domain-containing proteinO.I.C.G.S.X.
0.012e+034PtpAffx.203022.1.S1_atpmrna5982hypothetical protein-1e-8At4g17330ATG2484-1O.I.C.G.S.X.
0.022e+034Ptp.6311.2.S1_atCV252162--3e-94At5g35680eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putativeO.I.C.G.S.X.
0.022e+034Ptp.4828.1.S1_atBU812340hypothetical protein-2e-34At5g67030ABA1 (ABA DEFICIENT 1)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.061e-344At5g17790Arabidopsis thaliana831647VAR3 (VARIEGATED 3)Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells.---O.I.C.G.S.X.
0.035e-136GmaAffx.75107.1.A1_atGlycine maxCD410272--7e-1At5g37240unknown proteinO.I.C.G.S.X.
0.033e+032HI04I02u_atHordeum vulgareHI04I02u--5e+0At5g38480GRF3 (GENERAL REGULATORY FACTOR 3)O.I.C.G.S.X.
0.031e+132Os01g0567100Oryza sativa9629.m03670--8e-1At5g26840unknown proteinO.I.C.G.S.X.
0.036e+032TaAffx.66055.1.S1_atTriticum aestivumBJ210143--2e+0At1g80700unknown proteinO.I.C.G.S.X.
0.032e+0321608951_atVitis viniferaCF515796--9e-1At5g46090unknown proteinO.I.C.G.S.X.
0.026e-134Zm.11825.1.S1_atZea maysBM381071hypothetical protein LOC100276984-3e-2At5g65650unknown proteinO.I.C.G.S.X.



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