Homology analysis

Gene ID PtpAffx.15088.1.S1_at
Gene name hypothetical protein
Functional description Similar to At5g12330: LRP1 (LATERAL ROOT PRIMORDIUM 1) (Ev=7e-3)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.439e-74278PtpAffx.200895.1.S1_atpmrna1759hypothetical protein-1e-12At5g12330LRP1 (LATERAL ROOT PRIMORDIUM 1)O.I.C.G.S.X.
0.044e-240PtpAffx.106163.1.A1_atCV240193hypothetical protein-4e-1At3g18800unknown proteinO.I.C.G.S.X.
0.026e-136PtpAffx.48835.1.S1_atCV260897hypothetical protein-1e-7At3g18580single-strand-binding family proteinO.I.C.G.S.X.
0.036e-136PtpAffx.205309.1.S1_atpmrna10524hypothetical protein-3e-1At1g53035unknown proteinO.I.C.G.S.X.
0.022e+034PtpAffx.81893.1.A1_atCV268920AP2/ERF domain-containing transcription factor-2e-6At3g23240ERF1 (ETHYLENE RESPONSE FACTOR 1)O.I.C.G.S.X.
0.032e+034PtpAffx.44545.1.A1_atCV228040f-box family protein-2e+0At2g33030AtRLP25 (Receptor Like Protein 25)O.I.C.G.S.X.
0.012e+034PtpAffx.212076.1.S1_atpmrna23700hypothetical protein-6e-64At4g08180ORP1C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1C)O.I.C.G.S.X.
0.022e+034PtpAffx.208979.1.S1_atpmrna17792hypothetical protein-3e-9At1g68800TCP12 (TCP DOMAIN PROTEIN 12)O.I.C.G.S.X.
0.012e+034PtpAffx.206183.1.S1_atpmrna12275multidrug/pheromone exporter, MDR family, ABC transporter family-1e-4At2g47000ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.067e-342At5g12330Arabidopsis thaliana831108LRP1 (LATERAL ROOT PRIMORDIUM 1)A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation.---O.I.C.G.S.X.
0.042e+034GmaAffx.92737.1.S1_x_atGlycine maxCF808462--3e-16At3g11910UBP13 (UBIQUITIN-SPECIFIC PROTEASE 13)O.I.C.G.S.X.
0.023e+032rbaal35m01_s_atHordeum vulgarerbaal35m01--2e-8At3g09550protein bindingO.I.C.G.S.X.
0.033e+034Os01g0839000Oryza sativaNM_190518.1--3e-1At2g26120glycine-rich proteinO.I.C.G.S.X.
0.042e+034TaAffx.6283.1.S1_atTriticum aestivumCA688902--3e+0At2g05635ATP binding / ATP-dependent DNA helicase/ DNA bindingO.I.C.G.S.X.
0.031e-1361613441_s_atVitis viniferaCB973258hypothetical protein LOC100250052-2e-5At5g56540AGP14 (ARABINOGALACTAN PROTEIN 14)O.I.C.G.S.X.
0.021e+130ZmAffx.383.1.A1_atZea maysAI673962--2e-1At4g38370phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.C.G.S.X.



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