Homology analysis

Gene ID PtpAffx.12056.3.S1_a_at
Gene name 4-Coumarate:CoA ligase
Functional description Similar to At1g65060: 4CL3 (Ev=5e-22)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.031e-138PtpAffx.734.1.A1_s_atCV280029hypothetical protein-1e+0At1g80700unknown proteinO.I.C.G.S.X.
0.031e-138Ptp.4041.2.S1_s_atCV241905hypothetical protein-1e-4At4g269102-oxoacid dehydrogenase family proteinO.I.C.G.S.X.
0.045e-136PtpAffx.213524.1.S1_atpmrna26432hypothetical protein-5e-1At3g46430unknown proteinO.I.C.G.S.X.
0.015e-136PtpAffx.212349.1.S1_x_atpmrna24205hypothetical protein-1e-25At1g58350ZW18O.I.C.G.S.X.
0.025e-136PtpAffx.140158.1.A1_atCV243639hypothetical protein-6e-4At4g37860-O.I.C.G.S.X.
0.022e+034PtpAffx.224177.1.S1_atpmrna42465cytochrome P450 flavonoid 3',5'-hydroxylase-5e-5At3g48320CYP71A21O.I.C.G.S.X.
0.032e+034PtpAffx.20207.1.A1_atCV245803hypothetical protein-4e-1At5g62576unknown proteinO.I.C.G.S.X.
0.022e+034PtpAffx.18935.1.A1_atCV274812hypothetical protein-1e-1At5g25890IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)O.I.C.G.S.X.
0.022e+034PtpAffx.1729.1.A1_atCV284024hypothetical protein-2e-32At5g66570PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.255e-22105At1g65060Arabidopsis thaliana8428144CL3encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. mRNA levels are not induced in response to wounding or to fungal infection by P. parasitica. mRNA is expressed in flowers, to a lesser degree in mature leaves and siliques and marginally in seedling roots and bolting stems of mature plants. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, cinnamic acid and 5-OH-ferulic acid. At4CL3 was unable to use sinapic acid as substrate.---O.I.C.G.S.X.
0.214e-23109Gma.8472.1.S1_atGlycine maxBI9420984-coumarate:Coenzyme A ligase isoenzyme 4-2e-8At1g516804CL1 (4-COUMARATE:COA LIGASE 1)O.I.C.G.S.X.
0.188e-1683Contig4677_atHordeum vulgareContig4677--8e-3At1g650604CL3O.I.C.G.S.X.
0.105e-859Os02g0697400Oryza sativaAK105636.1-4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2)(4-coumaroyl-CoA synthase 2)8e-5At1g650604CL3O.I.C.G.S.X.
0.116e-342TaAffx.8533.2.S1_atTriticum aestivumCA627108--4e-3At3g212304CL5 (4-coumarate:CoA ligase 5)O.I.C.G.S.X.
0.308e-491921619320_atVitis viniferaCB974305--7e-13At1g650604CL3O.I.C.G.S.X.
0.207e-1683Zm.11845.1.A1_atZea maysCO532590--3e-1At1g650604CL3O.I.C.G.S.X.



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