Homology analysis
Gene ID
Ptp.6905.1.A1_s_at
Gene name
hypothetical protein
Functional description
Similar to At5g54580: RNA recognition motif (RRM)-containing protein (
Ev
=1e-7)
Click
gene/probe ID
to show a list of genes that are homologous to the gene.
Paralogous genes
HF
Ev
BS
Gene ID
Repr. ID
Gene Name
Functional Description
Ev
AGI code
Arabidopsis gene name
O.I.
C.G.
S.X.
Other DB
0.50
9e-145
513
PtpAffx.1476.2.A1_at
CV245573
hypothetical protein
-
5e-4
At5g54580
RNA recognition motif (RRM)-containing protein
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.03
4e-2
40
PtpAffx.99162.1.S1_at
CV279989
hypothetical protein
-
1e+0
At2g17870
cold-shock DNA-binding family protein
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.02
4e-2
40
PtpAffx.983.1.A1_at
CX172753
hypothetical protein
-
5e-10
At5g64180
unknown protein
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.02
4e-2
40
PtpAffx.9731.1.S1_at
CV255821
hypothetical protein
-
1e+1
At5g44582
unknown protein
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.01
4e-2
40
PtpAffx.9792.1.S1_s_at
BP930774
hypothetical protein
-
7e-24
At1g49760
PAB8 (POLY(A) BINDING PROTEIN 8)
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.03
4e-2
40
PtpAffx.97498.1.S1_at
CV246186
-
-
8e-2
At4g09890
unknown protein
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.02
4e-2
40
PtpAffx.95744.1.A1_at
CV238553
-
-
1e-41
At3g55280
RPL23AB (RIBOSOMAL PROTEIN L23AB)
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.03
4e-2
40
PtpAffx.95314.1.A1_at
CV252554
-
-
4e-2
At1g64930
CYP89A7
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
0.03
4e-2
40
PtpAffx.95404.1.A1_at
CV247625
-
-
1e+0
At2g28210
ATACA2 (ALPHA CARBONIC ANHYDRASE 2)
O.I.
C.G.
S.X.
Please select
eFP Browser (expression)
Orthologous genes
HF
Ev
BS
Gene ID
Organism
Repr. ID
Gene Name
Functional Description
Ev
AGI code
Arabidopsis gene name
O.I.
C.G.
S.X.
Other DB
0.23
1e-7
57
At5g54580
Arabidopsis thaliana
835546
RNA recognition motif (RRM)-containing protein
F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:unknown;MPFOBA
-
-
-
O.I.
C.G.
S.X.
Please select
ath
TAIR (integral)
ath,osa
KEGG (integral)
ath
PlantTribes (integral)
ath,osa
Gramene (integral)
ath
MPSS (genome)
ath
InParanoid (ortholog)
ath
Plant RBP (ortholog)
ath
SIGnAL (T-DNA)
ath
RAFL (full-length clone)
ath
AtGDB (genome)
ath
Genevestigator (expression)
ath,ptr
eFP Browser (expression)
ath
AVT (expression)
ath
ATTED-II (co-expression)
ath
AtcisDB (cis-element)
ath
SUBA (hydropathy)
ath
AtProteome
ath
Plant Proteome Database
ath
PMN (pathway)
ath,osa
KaPPA-View 4 (pathway)
ath
RnR (over-expression)
ath
iHOP (report)
0.12
8e-19
95
Gma.7350.1.S1_at
Glycine max
BU547120
-
-
3e-5
At5g54580
RNA recognition motif (RRM)-containing protein
O.I.
C.G.
S.X.
Please select
0.13
2e-10
65
HI05K16u_s_at
Hordeum vulgare
HI05K16u
-
-
9e-1
At1g24470
short-chain dehydrogenase/reductase (SDR) family protein
O.I.
C.G.
S.X.
Please select
0.12
1e-12
75
Os08g0139000
Oryza sativa
AK070704.1
-
RNA-binding glycine rich protein (RGP-2)
1e+0
At4g33610
glycine-rich protein
O.I.
C.G.
S.X.
Please select
ath,osa
KEGG (integral)
ath,osa
Gramene (integral)
ath,osa
KaPPA-View 4 (pathway)
0.11
2e-15
83
Ta.30799.1.S1_at
Triticum aestivum
CA663961
-
-
1e-1
At5g54580
RNA recognition motif (RRM)-containing protein
O.I.
C.G.
S.X.
Please select
0.08
8e-3
40
1610769_at
Vitis vinifera
CF211187
hypothetical protein LOC100254516
-
4e-4
At5g54580
RNA recognition motif (RRM)-containing protein
O.I.
C.G.
S.X.
Please select
0.04
1e-2
40
Zm.2397.1.A1_at
Zea mays
AY104240.1
nucleolin
-
2e+0
At1g64710
alcohol dehydrogenase, putative
O.I.
C.G.
S.X.
Please select
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