Homology analysis

Gene ID Ptp.1746.1.A1_at
Gene name hypothetical protein
Functional description Similar to At5g17790: VAR3 (VARIEGATED 3) (Ev=2e+0)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.185e-60232PtpAffx.158573.1.S1_atCX658654hypothetical protein-1e-3At5g17790VAR3 (VARIEGATED 3)O.I.C.G.S.X.
0.012e-138PtpAffx.214606.1.S1_atpmrna28387hypothetical protein-6e-12At3g28430unknown proteinO.I.C.G.S.X.
0.016e-136PtpAffx.203906.1.S1_atpmrna7716hypothetical protein-1e-5At2g44450BGLU15 (BETA GLUCOSIDASE 15)O.I.C.G.S.X.
0.023e+034PtpAffx.56104.1.A1_atCV278211hypothetical protein-2e-5At2g37060NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT B8)O.I.C.G.S.X.
0.013e+034PtpAffx.225182.1.S1_s_atpmrna44336tir-nbs-lrr resistance protein /// tir-nbs-lrr resistance protein /// hypothetical protein /// tir-nbs-lrr resistance protein-1e-2At4g12010disease resistance protein (TIR-NBS-LRR class), putativeO.I.C.G.S.X.
0.013e+034PtpAffx.224956.1.S1_atpmrna43898tir-nbs-lrr resistance protein-4e-2At4g16940ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptorO.I.C.G.S.X.
0.013e+034PtpAffx.212998.1.S1_s_atpmrna25415hypothetical protein-3e-15At4g37760SQE3 (squalene epoxidase 3)O.I.C.G.S.X.
0.023e+034PtpAffx.212986.1.S1_atpmrna25399hypothetical protein-3e-2At5g64240AtMC3 (metacaspase 3)O.I.C.G.S.X.
0.023e+034PtpAffx.140086.1.A1_atCV273245hypothetical protein-3e-1At1g11580PMEPCRA (METHYLESTERASE PCR A)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.022e+034At5g17790Arabidopsis thaliana831647VAR3 (VARIEGATED 3)Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells.---O.I.C.G.S.X.
0.181e-33145GmaAffx.69683.1.S1_atGlycine maxCA799656--7e-9At5g17790VAR3 (VARIEGATED 3)O.I.C.G.S.X.
0.031e+130HO15C14S_s_atHordeum vulgareHO15C14S--2e+0At5g55210unknown proteinO.I.C.G.S.X.
0.046e-1169Os01g0815700Oryza sativaAK073519.1-Zn-finger, Ran-binding domain containing protein5e-10At5g17790VAR3 (VARIEGATED 3)O.I.C.G.S.X.
0.032e+034Ta.18559.1.S1_atTriticum aestivumCA638720--3e+0At5g52980unknown proteinO.I.C.G.S.X.
0.261e-512021617399_atVitis viniferaCB342525hypothetical protein LOC100262132-5e-21At5g17790VAR3 (VARIEGATED 3)O.I.C.G.S.X.
0.023e+032Zm.4392.2.A1_a_atZea maysAW787551Ran-related GTP binding protein-3e-63At5g20020RAN2O.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage