Homology analysis

Gene ID Os09g0569400
Gene name
Functional description Similar to At5g23880: CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100) (Ev=7e-21)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.012e-140Os07g0110400AK058681.1-ARM repeat fold domain containing protein1e-17At5g15540EMB2773 (EMBRYO DEFECTIVE 2773)O.I.C.G.S.X.
0.016e-138Os06g0295500AK119433.1-Hypothetical protein3e-2At5g66815unknown proteinO.I.C.G.S.X.
0.016e-138Os06g02956009634.m01851--9e-2At4g27310zinc finger (B-box type) family proteinO.I.C.G.S.X.
0.016e-138Os08g03839019636.m02930--2e+0At2g21970SEP2 (STRESS ENHANCED PROTEIN 2)O.I.C.G.S.X.
0.013e+036Os02g0228400AK111683.1-Conserved hypothetical protein3e-4At5g61350protein kinase family proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.197e-21103At5g23880Arabidopsis thaliana832453CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus.---O.I.C.G.S.X.
0.043e-552GmaAffx.24635.1.A1_atGlycine maxCD418601--9e-23At5g23880CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)O.I.C.G.S.X.
0.281e-153543Contig16128_atHordeum vulgareContig16128--7e-15At5g23880CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)O.I.C.G.S.X.
0.172e-1585PtpAffx.103932.1.S1_atPopulus trichocarpaCX175756--5e-20At5g23880CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)O.I.C.G.S.X.
0.222e-116420Ta.12414.1.S1_atTriticum aestivumBQ172285--2e-9At5g23880CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)O.I.C.G.S.X.
0.012e+0341615452_atVitis viniferaCB345337hypothetical protein LOC100255210-1e-25At3g55200splicing factor, putativeO.I.C.G.S.X.
0.084e-2099Zm.4238.1.A1_atZea maysBM073006cleavage and polyadenylation specificity factor, 100 kDa subunit-8e-1At2g14282SCRL18 (SCR-Like 18)O.I.C.G.S.X.



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