Homology analysis

Gene ID Os09g0407600
Gene name
Functional description Similar to At4g02070: MSH6 (MUTS HOMOLOG 6) (Ev=4e-17)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.014e-346Os07g0548300NM_185739.1-CRP14e-6At5g42310pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.S.X.
0.012e-244Os01g0924300AK100821.1-WD40-like domain containing protein6e-5At4g18900transducin family protein / WD-40 repeat family proteinO.I.C.G.S.X.
0.012e-244Os02g0537700AK068919.1-2-cys peroxiredoxin BAS1, chloroplast precursor(Thiol-specific antioxidant protein) (Fragment)2e-71At3g116302-cys peroxiredoxin, chloroplast (BAS1)O.I.C.G.S.X.
0.012e-244Os09g0414500AK058840.1-ZF-HD homeobox protein5e-3At3g28917MIF2 (MINI ZINC FINGER 2)O.I.C.G.S.X.
0.012e-244Os11g0572800AK068220.1-Cyclin-like F-box domain containing protein9e-32At5g06550-O.I.C.G.S.X.
0.016e-242Os04g0481400AK105549.1--1e-3At3g48330PIMT1 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 1)O.I.C.G.S.X.
0.016e-242Os07g0671400AK067933.1-Heavy metal transport/detoxification proteindomain containing protein6e-1At3g1874060S ribosomal protein L30 (RPL30C)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.074e-1791At4g02070Arabidopsis thaliana828147MSH6 (MUTS HOMOLOG 6)encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex.---O.I.C.G.S.X.
0.017e-138PsAffx.C51000035_atGlycine maxPsAffx.C51000035--1e+0At3g02770dimethylmenaquinone methyltransferase family proteinO.I.C.G.S.X.
0.141e-49198Contig22271_atHordeum vulgareContig22271--9e+0At3g55470C2 domain-containing proteinO.I.C.G.S.X.
0.155e-1791PtpAffx.208305.1.S1_atPopulus trichocarpapmrna16520hypothetical protein-6e-46At4g02070MSH6 (MUTS HOMOLOG 6)O.I.C.G.S.X.
0.103e-79297Ta.24096.1.S1_atTriticum aestivumAJ131670.2MSH6 protein-3e-2At3g43700ATBPM6 (BTB-POZ and MATH domain 6)O.I.C.G.S.X.
0.016e-1361610435_s_atVitis viniferaCB340175hypothetical protein LOC100261843-2e-3At5g44280RING1A (RING 1A)O.I.C.G.S.X.
0.470819Zm.481.1.S1_atZea maysAF227632.1mismatch binding protein Mus3-2e-8At4g02070MSH6 (MUTS HOMOLOG 6)O.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage